Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YIL054WYIL054W 318 nt5.28□□□□□ -1.56
RKR1Q04781 YPT7YML001W 627 nt5.28□□□□□ -1.56
RKR1Q04781 MDM1YML104C 3384 nt5.28□□□□□ -1.56
RKR1Q04781 YJR128WYJR128W 360 nt5.27□□□□□ -1.57
RKR1Q04781 NHX1YDR456W 1902 nt5.27□□□□□ -1.57
RKR1Q04781 YTA6YPL074W 2265 nt5.26□□□□□ -1.57
RKR1Q04781 YPL216WYPL216W 3309 nt5.26□□□□□ -1.57
RKR1Q04781 FLC3YGL139W 2409 nt5.26□□□□□ -1.57
RKR1Q04781 MCX1YBR227C 1563 nt5.26□□□□□ -1.57
RKR1Q04781 NIP7YPL211W 546 nt5.25□□□□□ -1.57
RKR1Q04781 MEC3YLR288C 1425 nt5.25□□□□□ -1.57
RKR1Q04781 BUB1YGR188C 3066 nt5.25□□□□□ -1.57
RKR1Q04781 MED4YOR174W 855 nt5.25□□□□□ -1.57
RKR1Q04781 VBA1YMR088C 1689 nt5.24□□□□□ -1.57
RKR1Q04781 VMA1YDL185W 3216 nt5.24□□□□□ -1.57
RKR1Q04781 RPL34AYER056C-A 366 nt5.24□□□□□ -1.57
RKR1Q04781 SHO1YER118C 1104 nt5.24□□□□□ -1.57
RKR1Q04781 COS8YHL048W 1146 nt5.24□□□□□ -1.57
RKR1Q04781 ELM1YKL048C 1923 nt5.23□□□□□ -1.57
RKR1Q04781 CHL4YDR254W 1377 nt5.23□□□□□ -1.57
RKR1Q04781 MET10YFR030W 3108 nt5.23□□□□□ -1.57
RKR1Q04781 NHP10YDL002C 612 nt5.23□□□□□ -1.57
RKR1Q04781 YHL034W-AYHL034W-A 462 nt5.23□□□□□ -1.57
RKR1Q04781 MRPL16YBL038W 699 nt5.23□□□□□ -1.57
RKR1Q04781 ARG5,6YER069W 2592 nt5.23□□□□□ -1.57
RKR1Q04781 EXO1YOR033C 2109 nt5.23□□□□□ -1.57
RKR1Q04781 HAT2YEL056W 1206 nt5.22□□□□□ -1.57
RKR1Q04781 RAI1YGL246C 1164 nt5.22□□□□□ -1.57
RKR1Q04781 RIM9YMR063W 720 nt5.22□□□□□ -1.57
RKR1Q04781 YFL052WYFL052W 1398 nt5.22□□□□□ -1.57
RKR1Q04781 ECM21YBL101C 3354 nt5.21□□□□□ -1.57
RKR1Q04781 YJL175WYJL175W 513 nt5.21□□□□□ -1.57
RKR1Q04781 YML020WYML020W 1995 nt5.21□□□□□ -1.58
RKR1Q04781 MLH2YLR035C 2088 nt5.21□□□□□ -1.58
RKR1Q04781 NGL2YMR285C 1548 nt5.2□□□□□ -1.58
RKR1Q04781 GSC2YGR032W 5688 nt5.2□□□□□ -1.58
RKR1Q04781 PEA2YER149C 1263 nt5.2□□□□□ -1.58
RKR1Q04781 PAN5YHR063C 1140 nt5.2□□□□□ -1.58
RKR1Q04781 MDM12YOL009C 816 nt5.2□□□□□ -1.58
RKR1Q04781 NOC2YOR206W 2133 nt5.2□□□□□ -1.58
RKR1Q04781 snR32snR32 188 nt5.2□□□□□ -1.58
RKR1Q04781 tK(UUU)DtK(UUU)D 73 nt5.19□□□□□ -1.58
RKR1Q04781 tK(UUU)G1tK(UUU)G1 73 nt5.19□□□□□ -1.58
RKR1Q04781 tK(UUU)G2tK(UUU)G2 73 nt5.19□□□□□ -1.58
RKR1Q04781 tK(UUU)KtK(UUU)K 73 nt5.19□□□□□ -1.58
RKR1Q04781 tK(UUU)LtK(UUU)L 73 nt5.19□□□□□ -1.58
RKR1Q04781 tK(UUU)OtK(UUU)O 73 nt5.19□□□□□ -1.58
RKR1Q04781 tK(UUU)PtK(UUU)P 73 nt5.19□□□□□ -1.58
RKR1Q04781 CDC26YFR036W 375 nt5.19□□□□□ -1.58
RKR1Q04781 MAK16YAL025C 921 nt5.19□□□□□ -1.58
RKR1Q04781 RPL8BYLL045C 771 nt5.19□□□□□ -1.58
RKR1Q04781 SRO7YPR032W 3102 nt5.18□□□□□ -1.58
RKR1Q04781 RPB2YOR151C 3675 nt5.18□□□□□ -1.58
RKR1Q04781 MKC7YDR144C 1791 nt5.18□□□□□ -1.58
RKR1Q04781 YLR156WYLR156W 345 nt5.18□□□□□ -1.58
RKR1Q04781 YLR159WYLR159W 345 nt5.18□□□□□ -1.58
RKR1Q04781 YLR161WYLR161W 345 nt5.18□□□□□ -1.58
RKR1Q04781 FAS2YPL231W 5664 nt5.18□□□□□ -1.58
RKR1Q04781 CAF120YNL278W 3183 nt5.18□□□□□ -1.58
RKR1Q04781 VID28YIL017C 2766 nt5.17□□□□□ -1.58
RKR1Q04781 COX14YML129C 213 nt5.17□□□□□ -1.58
RKR1Q04781 MED7YOL135C 669 nt5.16□□□□□ -1.58
RKR1Q04781 snR42snR42 351 nt5.16□□□□□ -1.58
RKR1Q04781 YMR317WYMR317W 3423 nt5.16□□□□□ -1.58
RKR1Q04781 YLH47YPR125W 1365 nt5.16□□□□□ -1.58
RKR1Q04781 MRPL11YDL202W 750 nt5.16□□□□□ -1.58
RKR1Q04781 MRP13YGR084C 1020 nt5.16□□□□□ -1.58
RKR1Q04781 AUR1YKL004W 1206 nt5.16□□□□□ -1.58
RKR1Q04781 NOP4YPL043W 2058 nt5.15□□□□□ -1.58
RKR1Q04781 NOP7YGR103W 1818 nt5.15□□□□□ -1.58
RKR1Q04781 BMH2YDR099W 822 nt5.15□□□□□ -1.59
RKR1Q04781 RPS8BYER102W 603 nt5.15□□□□□ -1.59
RKR1Q04781 TMA10YLR327C 261 nt5.15□□□□□ -1.59
RKR1Q04781 RPS8AYBL072C 603 nt5.15□□□□□ -1.59
RKR1Q04781 YNL320WYNL320W 855 nt5.15□□□□□ -1.59
RKR1Q04781 CDC21YOR074C 915 nt5.15□□□□□ -1.59
RKR1Q04781 PAP1YKR002W 1707 nt5.14□□□□□ -1.59
RKR1Q04781 GOT1YMR292W 417 nt5.13□□□□□ -1.59
RKR1Q04781 NUP60YAR002W 1620 nt5.13□□□□□ -1.59
RKR1Q04781 YHR202WYHR202W 1809 nt5.13□□□□□ -1.59
RKR1Q04781 IMD4YML056C 1575 nt5.12□□□□□ -1.59
RKR1Q04781 NUS1YDL193W 1128 nt5.12□□□□□ -1.59
RKR1Q04781 TAF7YMR227C 1773 nt5.12□□□□□ -1.59
RKR1Q04781 YGR125WYGR125W 3111 nt5.12□□□□□ -1.59
RKR1Q04781 DRS2YAL026C 4068 nt5.12□□□□□ -1.59
RKR1Q04781 YFR052C-AYFR052C-A 306 nt5.12□□□□□ -1.59
RKR1Q04781 LCL2YLR104W 396 nt5.12□□□□□ -1.59
RKR1Q04781 YBL108WYBL108W 306 nt5.12□□□□□ -1.59
RKR1Q04781 URA7YBL039C 1740 nt5.11□□□□□ -1.59
RKR1Q04781 RTK1YDL025C 1863 nt5.11□□□□□ -1.59
RKR1Q04781 SOF1YLL011W 1470 nt5.11□□□□□ -1.59
RKR1Q04781 TPM1YNL079C 600 nt5.11□□□□□ -1.59
RKR1Q04781 SFI1YLL003W 2841 nt5.1□□□□□ -1.59
RKR1Q04781 INN1YNL152W 1230 nt5.1□□□□□ -1.59
RKR1Q04781 SET5YHR207C 1581 nt5.1□□□□□ -1.59
RKR1Q04781 SWP82YFL049W 1872 nt5.1□□□□□ -1.59
RKR1Q04781 PRP40YKL012W 1752 nt5.09□□□□□ -1.59
RKR1Q04781 YHL026CYHL026C 948 nt5.09□□□□□ -1.59
RKR1Q04781 YBL039W-BYBL039W-B 180 nt5.09□□□□□ -1.59
RKR1Q04781 SEC53YFL045C 765 nt5.08□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 27.2 ms