Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.15■□□□□ 0.185e-7■■■■□ 21
EWSR1Q01844 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.15e-7■■■■□ 21
EWSR1Q01844 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.185e-7■■■■□ 21
EWSR1Q01844 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.55□□□□□ -0.45e-7■■■■□ 21
EWSR1Q01844 RREB1-205ENST00000467782 243 ntTSL 511.69□□□□□ -0.545e-7■■■■□ 21
EWSR1Q01844 RREB1-209ENST00000491191 998 ntTSL 510.2□□□□□ -0.785e-7■■■■□ 21
EWSR1Q01844 RREB1-206ENST00000471433 1021 ntTSL 510.2□□□□□ -0.785e-7■■■■□ 21
EWSR1Q01844 CYHR1-211ENST00000533173 6158 ntTSL 1 (best)12.93□□□□□ -0.342e-7■■■■□ 21
EWSR1Q01844 TCF25-222ENST00000568412 797 ntTSL 312.49□□□□□ -0.411e-6■■■■□ 20.9
EWSR1Q01844 TCF25-204ENST00000561958 763 ntTSL 312.49□□□□□ -0.411e-6■■■■□ 20.9
EWSR1Q01844 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.56□□□□□ -0.243e-7■■■■□ 20.9
EWSR1Q01844 BCL9L-205ENST00000532899 611 ntTSL 511.97□□□□□ -0.493e-7■■■■□ 20.9
EWSR1Q01844 DENND4A-208ENST00000568515 2655 ntTSL 218.72■□□□□ 0.593e-10■■■■□ 20.9
EWSR1Q01844 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.45■□□□□ 0.544e-7■■■■□ 20.9
EWSR1Q01844 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.34e-7■■■■□ 20.9
EWSR1Q01844 DENND4A-206ENST00000564674 3389 ntTSL 1 (best)16.03■□□□□ 0.163e-10■■■■□ 20.9
EWSR1Q01844 AC073111.5-205ENST00000641717 521 ntBASIC15.54■□□□□ 0.084e-7■■■■□ 20.9
EWSR1Q01844 AC073111.5-203ENST00000641234 559 nt13.75□□□□□ -0.214e-7■■■■□ 20.9
EWSR1Q01844 AC073111.5-201ENST00000641330 2582 nt12.59□□□□□ -0.394e-7■■■■□ 20.9
EWSR1Q01844 CNOT6L-207ENST00000515441 572 ntTSL 411.45□□□□□ -0.584e-7■■■■□ 20.9
EWSR1Q01844 AC073111.5-202ENST00000641849 576 nt8.04□□□□□ -1.124e-7■■■■□ 20.9
EWSR1Q01844 CNOT6L-204ENST00000506166 781 ntTSL 28.02□□□□□ -1.134e-7■■■■□ 20.9
EWSR1Q01844 KDM4B-209ENST00000592159 411 ntTSL 37.75□□□□□ -1.179e-7■■■■□ 20.9
EWSR1Q01844 CNOT6L-202ENST00000504804 1925 ntTSL 55.09□□□□□ -1.64e-7■■■■□ 20.9
EWSR1Q01844 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.653e-10■■■■□ 20.9
EWSR1Q01844 CNOT6L-206ENST00000512485 1890 ntTSL 54.71□□□□□ -1.664e-7■■■■□ 20.9
EWSR1Q01844 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.984e-7■■■■□ 20.9
EWSR1Q01844 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.12□□□□□ -2.073e-10■■■■□ 20.9
EWSR1Q01844 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.25e-7■■■■□ 20.9
EWSR1Q01844 ZNF580-206ENST00000592881 1019 ntTSL 315.64■□□□□ 0.093e-6■■■■□ 20.9
EWSR1Q01844 LZTS2-204ENST00000429732 701 ntTSL 513.01□□□□□ -0.335e-7■■■■□ 20.9
EWSR1Q01844 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.723e-6■■■■□ 20.9
EWSR1Q01844 LZTS2-206ENST00000481129 745 ntTSL 310.36□□□□□ -0.755e-7■■■■□ 20.9
EWSR1Q01844 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.28■□□□□ 0.24e-7■■■■□ 20.9
EWSR1Q01844 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.77■□□□□ 0.767e-7■■■■□ 20.9
EWSR1Q01844 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.77e-7■■■■□ 20.9
EWSR1Q01844 R3HDM4-204ENST00000589428 1704 ntTSL 316.63■□□□□ 0.257e-7■■■■□ 20.9
EWSR1Q01844 R3HDM4-206ENST00000590454 1006 ntTSL 316.2■□□□□ 0.187e-7■■■■□ 20.9
EWSR1Q01844 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.02■□□□□ 0.486e-7■■■■□ 20.9
EWSR1Q01844 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.82■□□□□ 0.286e-7■■■■□ 20.9
EWSR1Q01844 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.97■□□□□ 0.156e-7■■■■□ 20.9
EWSR1Q01844 HNRNPUL1-219ENST00000601336 754 ntTSL 214.6□□□□□ -0.076e-7■■■■□ 20.9
EWSR1Q01844 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.256e-7■■■■□ 20.9
EWSR1Q01844 HNRNPUL1-208ENST00000595196 3043 ntTSL 1 (best)13.4□□□□□ -0.266e-7■■■■□ 20.9
EWSR1Q01844 HNRNPUL1-214ENST00000599719 1473 ntTSL 1 (best)12.18□□□□□ -0.466e-7■■■■□ 20.9
EWSR1Q01844 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.536e-7■■■■□ 20.9
EWSR1Q01844 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.67□□□□□ -0.546e-7■■■■□ 20.9
EWSR1Q01844 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC10.37□□□□□ -0.756e-7■■■■□ 20.9
EWSR1Q01844 HNRNPUL1-218ENST00000601309 672 ntTSL 59.88□□□□□ -0.836e-7■■■■□ 20.9
EWSR1Q01844 HNRNPUL1-211ENST00000597725 573 ntTSL 47.37□□□□□ -1.236e-7■■■■□ 20.9
EWSR1Q01844 MED16-206ENST00000586342 635 ntTSL 1 (best)16.45■□□□□ 0.222e-6■■■■□ 20.8
EWSR1Q01844 MED16-208ENST00000592373 927 ntTSL 313.54□□□□□ -0.242e-6■■■■□ 20.8
EWSR1Q01844 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.172e-6■■■■□ 20.8
EWSR1Q01844 ANKRD11-210ENST00000566858 580 ntTSL 411.86□□□□□ -0.516e-7■■■■□ 20.8
EWSR1Q01844 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.55□□□□□ -0.41e-6■■■■□ 20.8
EWSR1Q01844 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.581e-6■■■■□ 20.8
EWSR1Q01844 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.612e-6■■■■□ 20.8
EWSR1Q01844 CORO7-PAM16-203ENST00000575334 3815 ntTSL 215.26■□□□□ 0.032e-6■■■■□ 20.8
EWSR1Q01844 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.632e-6■■■■□ 20.8
EWSR1Q01844 SPPL2B-201ENST00000585725 583 ntTSL 312.22□□□□□ -0.459e-7■■■■□ 20.8
EWSR1Q01844 SUN1-206ENST00000413171 4488 ntTSL 59.83□□□□□ -0.841e-6■■■■□ 20.8
EWSR1Q01844 SUN1-212ENST00000429178 3701 ntTSL 1 (best)9.52□□□□□ -0.891e-6■■■■□ 20.8
EWSR1Q01844 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC8.77□□□□□ -1.011e-6■■■■□ 20.8
EWSR1Q01844 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC8.5□□□□□ -1.051e-6■■■■□ 20.8
EWSR1Q01844 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.11e-6■■■■□ 20.8
EWSR1Q01844 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC8.02□□□□□ -1.131e-6■■■■□ 20.8
EWSR1Q01844 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.151e-6■■■■□ 20.8
EWSR1Q01844 FAM102A-207ENST00000494606 536 ntTSL 310.93□□□□□ -0.663e-6■■■■□ 20.7
EWSR1Q01844 PTPN12-205ENST00000433369 552 ntTSL 59.32□□□□□ -0.923e-8■■■■□ 20.7
EWSR1Q01844 PTPN12-203ENST00000415482 2316 ntTSL 5 BASIC7.75□□□□□ -1.173e-8■■■■□ 20.7
EWSR1Q01844 SUN1-222ENST00000457861 2975 ntTSL 213.96□□□□□ -0.176e-7■■■■□ 20.7
EWSR1Q01844 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC10.48□□□□□ -0.739e-7■■■■□ 20.7
EWSR1Q01844 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.73■□□□□ 0.595e-7■■■■□ 20.7
EWSR1Q01844 R3HDM4-205ENST00000589445 705 ntTSL 317.08■□□□□ 0.325e-7■■■■□ 20.7
EWSR1Q01844 SEPT9-218ENST00000587514 540 ntTSL 516.03■□□□□ 0.162e-6■■■■□ 20.7
EWSR1Q01844 SEPT9-230ENST00000590586 572 ntTSL 414.84□□□□□ -0.032e-6■■■■□ 20.7
EWSR1Q01844 EEF1D-237ENST00000531281 813 ntTSL 212.65□□□□□ -0.386e-8■■■■□ 20.7
EWSR1Q01844 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.554e-7■■■■□ 20.7
EWSR1Q01844 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)16.41■□□□□ 0.224e-7■■■■□ 20.7
EWSR1Q01844 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.07■□□□□ 0.641e-6■■■■□ 20.7
EWSR1Q01844 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.241e-6■■■■□ 20.7
EWSR1Q01844 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.121e-6■■■■□ 20.7
EWSR1Q01844 MVD-211ENST00000565720 436 ntTSL 313.35□□□□□ -0.277e-8■■■■□ 20.7
EWSR1Q01844 PISD-213ENST00000474017 1760 ntTSL 514.46□□□□□ -0.091e-6■■■■□ 20.7
EWSR1Q01844 PISD-212ENST00000473770 2378 ntTSL 514.19□□□□□ -0.141e-6■■■■□ 20.7
EWSR1Q01844 PISD-211ENST00000460723 2534 ntTSL 1 (best)12.22□□□□□ -0.451e-6■■■■□ 20.7
EWSR1Q01844 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.491e-6■■■■□ 20.7
EWSR1Q01844 PISD-205ENST00000429683 609 ntTSL 311.26□□□□□ -0.611e-6■■■■□ 20.7
EWSR1Q01844 PISD-206ENST00000431201 460 ntTSL 411.26□□□□□ -0.611e-6■■■■□ 20.7
EWSR1Q01844 PISD-203ENST00000397500 2194 ntTSL 5 BASIC11.13□□□□□ -0.631e-6■■■■□ 20.7
EWSR1Q01844 PISD-217ENST00000491342 692 ntTSL 511.02□□□□□ -0.651e-6■■■■□ 20.7
EWSR1Q01844 PISD-208ENST00000437808 2264 ntTSL 510.22□□□□□ -0.771e-6■■■■□ 20.7
EWSR1Q01844 PISD-201ENST00000266095 2655 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.881e-6■■■■□ 20.7
EWSR1Q01844 PISD-207ENST00000435900 1723 ntTSL 58.86□□□□□ -0.991e-6■■■■□ 20.7
EWSR1Q01844 PISD-204ENST00000422020 1015 ntTSL 58.22□□□□□ -1.091e-6■■■■□ 20.7
EWSR1Q01844 HOXC6-204ENST00000509328 358 ntTSL 315.04■□□□□ -03e-6■■■■□ 20.7
EWSR1Q01844 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.583e-6■■■■□ 20.7
EWSR1Q01844 HOXC6-203ENST00000504315 538 ntTSL 310.02□□□□□ -0.813e-6■■■■□ 20.7
EWSR1Q01844 MAD1L1-219ENST00000481633 548 ntTSL 210.83□□□□□ -0.685e-7■■■■□ 20.7
EWSR1Q01844 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.86e-8■■■■□ 20.7
Retrieved 100 of 7,101 protein–RNA pairs in 67.1 ms