Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H3AP68431 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H3AP68431 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H3AP68431 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H3AP68431 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.36■□□□□ 0.69
HIST1H3AP68431 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HIST1H3AP68431 AL499627.2-201ENST00000606283 725 ntBASIC19.36■□□□□ 0.69
HIST1H3AP68431 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H3AP68431 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H3AP68431 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H3AP68431 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HIST1H3AP68431 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.36■□□□□ 0.69
HIST1H3AP68431 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.36■□□□□ 0.69
HIST1H3AP68431 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H3AP68431 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H3AP68431 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H3AP68431 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H3AP68431 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H3AP68431 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HIST1H3AP68431 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
HIST1H3AP68431 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.35■□□□□ 0.69
HIST1H3AP68431 AC241377.3-202ENST00000626088 1088 ntBASIC19.35■□□□□ 0.69
HIST1H3AP68431 AC241585.3-202ENST00000628937 1088 ntBASIC19.35■□□□□ 0.69
HIST1H3AP68431 AC245100.8-202ENST00000629247 1058 ntBASIC19.35■□□□□ 0.69
HIST1H3AP68431 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H3AP68431 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.34■□□□□ 0.69
HIST1H3AP68431 AL356441.2-201ENST00000443009 864 ntBASIC19.34■□□□□ 0.69
HIST1H3AP68431 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.34■□□□□ 0.69
HIST1H3AP68431 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.34■□□□□ 0.69
HIST1H3AP68431 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HIST1H3AP68431 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H3AP68431 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.34■□□□□ 0.69
HIST1H3AP68431 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HIST1H3AP68431 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST1H3AP68431 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST1H3AP68431 AC079834.2-201ENST00000609776 1949 ntBASIC19.33■□□□□ 0.69
HIST1H3AP68431 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST1H3AP68431 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST1H3AP68431 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HIST1H3AP68431 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HIST1H3AP68431 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H3AP68431 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.33■□□□□ 0.68
HIST1H3AP68431 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H3AP68431 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.33■□□□□ 0.68
HIST1H3AP68431 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H3AP68431 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H3AP68431 GUSBP5-202ENST00000510805 1989 ntBASIC19.33■□□□□ 0.68
HIST1H3AP68431 AC087742.1-201ENST00000575880 1738 ntBASIC19.33■□□□□ 0.68
HIST1H3AP68431 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H3AP68431 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H3AP68431 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H3AP68431 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H3AP68431 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H3AP68431 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H3AP68431 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.32■□□□□ 0.68
HIST1H3AP68431 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.32■□□□□ 0.68
HIST1H3AP68431 AL512631.2-201ENST00000604634 923 ntBASIC19.32■□□□□ 0.68
HIST1H3AP68431 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H3AP68431 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HIST1H3AP68431 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H3AP68431 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H3AP68431 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HIST1H3AP68431 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H3AP68431 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.32■□□□□ 0.68
HIST1H3AP68431 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H3AP68431 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H3AP68431 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H3AP68431 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H3AP68431 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H3AP68431 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
HIST1H3AP68431 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H3AP68431 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST1H3AP68431 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.31■□□□□ 0.68
HIST1H3AP68431 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H3AP68431 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H3AP68431 ECEL1P1-201ENST00000373592 1742 ntBASIC19.31■□□□□ 0.68
HIST1H3AP68431 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H3AP68431 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H3AP68431 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H3AP68431 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H3AP68431 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H3AP68431 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.3■□□□□ 0.68
HIST1H3AP68431 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.3■□□□□ 0.68
HIST1H3AP68431 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HIST1H3AP68431 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H3AP68431 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H3AP68431 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HIST1H3AP68431 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms