Protein–RNA interactions for Protein: P61018

RAB4B, Ras-related protein Rab-4B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4BP61018 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
RAB4BP61018 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RAB4BP61018 ANOS2P-203ENST00000472227 1816 ntBASIC17.15■□□□□ 0.34
RAB4BP61018 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB4BP61018 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB4BP61018 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB4BP61018 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB4BP61018 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RAB4BP61018 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB4BP61018 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
RAB4BP61018 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB4BP61018 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB4BP61018 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB4BP61018 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB4BP61018 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB4BP61018 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB4BP61018 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB4BP61018 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RAB4BP61018 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB4BP61018 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB4BP61018 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB4BP61018 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RAB4BP61018 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB4BP61018 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB4BP61018 ZNRF2P2-203ENST00000454624 420 ntBASIC17.14■□□□□ 0.33
RAB4BP61018 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB4BP61018 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB4BP61018 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB4BP61018 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB4BP61018 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB4BP61018 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB4BP61018 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB4BP61018 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB4BP61018 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB4BP61018 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB4BP61018 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB4BP61018 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB4BP61018 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB4BP61018 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB4BP61018 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB4BP61018 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB4BP61018 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB4BP61018 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB4BP61018 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB4BP61018 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB4BP61018 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB4BP61018 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB4BP61018 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB4BP61018 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB4BP61018 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB4BP61018 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
RAB4BP61018 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB4BP61018 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB4BP61018 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB4BP61018 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB4BP61018 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RAB4BP61018 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB4BP61018 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RAB4BP61018 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB4BP61018 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB4BP61018 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB4BP61018 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB4BP61018 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4BP61018 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB4BP61018 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4BP61018 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB4BP61018 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4BP61018 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB4BP61018 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RAB4BP61018 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4BP61018 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4BP61018 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4BP61018 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB4BP61018 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4BP61018 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB4BP61018 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4BP61018 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4BP61018 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RAB4BP61018 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4BP61018 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB4BP61018 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB4BP61018 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAB4BP61018 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB4BP61018 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB4BP61018 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB4BP61018 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB4BP61018 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB4BP61018 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms