Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN18P56856 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN18P56856 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN18P56856 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN18P56856 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN18P56856 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN18P56856 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN18P56856 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN18P56856 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN18P56856 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN18P56856 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.83■□□□□ 0.77
CLDN18P56856 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN18P56856 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.83■□□□□ 0.77
CLDN18P56856 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN18P56856 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.83■□□□□ 0.77
CLDN18P56856 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN18P56856 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CLDN18P56856 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN18P56856 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
CLDN18P56856 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN18P56856 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CLDN18P56856 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
CLDN18P56856 TSPY26P-201ENST00000476365 1326 ntBASIC19.82■□□□□ 0.76
CLDN18P56856 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN18P56856 IRS3P-201ENST00000223076 1006 ntBASIC19.82■□□□□ 0.76
CLDN18P56856 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CLDN18P56856 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN18P56856 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLDN18P56856 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN18P56856 IGHV3-19-201ENST00000521488 291 ntBASIC19.82■□□□□ 0.76
CLDN18P56856 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN18P56856 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN18P56856 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN18P56856 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN18P56856 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN18P56856 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLDN18P56856 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN18P56856 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN18P56856 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN18P56856 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN18P56856 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN18P56856 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLDN18P56856 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN18P56856 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
CLDN18P56856 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN18P56856 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDN18P56856 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN18P56856 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.81■□□□□ 0.76
CLDN18P56856 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.81■□□□□ 0.76
CLDN18P56856 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN18P56856 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLDN18P56856 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN18P56856 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN18P56856 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN18P56856 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLDN18P56856 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN18P56856 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN18P56856 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN18P56856 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN18P56856 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN18P56856 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CLDN18P56856 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN18P56856 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLDN18P56856 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN18P56856 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN18P56856 AP005435.1-201ENST00000529293 1178 ntBASIC19.8■□□□□ 0.76
CLDN18P56856 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN18P56856 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN18P56856 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN18P56856 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CLDN18P56856 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CLDN18P56856 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CLDN18P56856 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN18P56856 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN18P56856 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN18P56856 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLDN18P56856 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN18P56856 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN18P56856 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN18P56856 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN18P56856 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN18P56856 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN18P56856 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN18P56856 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CLDN18P56856 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN18P56856 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN18P56856 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN18P56856 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN18P56856 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN18P56856 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN18P56856 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN18P56856 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN18P56856 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN18P56856 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN18P56856 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CLDN18P56856 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN18P56856 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN18P56856 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN18P56856 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN18P56856 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms