Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 YBX1P1-201ENST00000445822 960 ntBASIC20.32■□□□□ 0.84
PER3P56645 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.32■□□□□ 0.84
PER3P56645 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PER3P56645 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PER3P56645 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PER3P56645 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PER3P56645 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.31■□□□□ 0.84
PER3P56645 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PER3P56645 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PER3P56645 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PER3P56645 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PER3P56645 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PER3P56645 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PER3P56645 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PER3P56645 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PER3P56645 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PER3P56645 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PER3P56645 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PER3P56645 AL161729.1-201ENST00000604104 1402 ntBASIC20.3■□□□□ 0.84
PER3P56645 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.3■□□□□ 0.84
PER3P56645 AC022211.4-201ENST00000625094 2161 ntBASIC20.3■□□□□ 0.84
PER3P56645 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PER3P56645 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.3■□□□□ 0.84
PER3P56645 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.3■□□□□ 0.84
PER3P56645 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.3■□□□□ 0.84
PER3P56645 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PER3P56645 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
PER3P56645 AC009102.2-201ENST00000606772 1639 ntBASIC20.3■□□□□ 0.84
PER3P56645 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PER3P56645 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
PER3P56645 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PER3P56645 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.29■□□□□ 0.84
PER3P56645 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PER3P56645 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PER3P56645 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.29■□□□□ 0.84
PER3P56645 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PER3P56645 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PER3P56645 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.29■□□□□ 0.84
PER3P56645 AC126544.1-201ENST00000580842 1059 ntBASIC20.29■□□□□ 0.84
PER3P56645 IKBKGP1-201ENST00000612193 1073 ntBASIC20.29■□□□□ 0.84
PER3P56645 AC009086.3-201ENST00000623486 1008 ntBASIC20.29■□□□□ 0.84
PER3P56645 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.29■□□□□ 0.84
PER3P56645 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PER3P56645 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PER3P56645 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PER3P56645 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PER3P56645 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PER3P56645 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PER3P56645 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PER3P56645 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PER3P56645 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PER3P56645 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PER3P56645 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PER3P56645 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PER3P56645 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PER3P56645 KRT18P5-201ENST00000436075 1291 ntBASIC20.28■□□□□ 0.84
PER3P56645 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PER3P56645 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PER3P56645 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.28■□□□□ 0.84
PER3P56645 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.28■□□□□ 0.84
PER3P56645 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PER3P56645 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.28■□□□□ 0.84
PER3P56645 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PER3P56645 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PER3P56645 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PER3P56645 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PER3P56645 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PER3P56645 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PER3P56645 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PER3P56645 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PER3P56645 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PER3P56645 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.27■□□□□ 0.84
PER3P56645 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
PER3P56645 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.27■□□□□ 0.84
PER3P56645 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PER3P56645 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PER3P56645 C17orf82-201ENST00000623772 1530 ntBASIC20.27■□□□□ 0.83
PER3P56645 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.27■□□□□ 0.83
PER3P56645 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PER3P56645 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PER3P56645 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.26■□□□□ 0.83
PER3P56645 AP003733.4-201ENST00000623785 1697 ntBASIC20.26■□□□□ 0.83
PER3P56645 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.26■□□□□ 0.83
PER3P56645 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.26■□□□□ 0.83
PER3P56645 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PER3P56645 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PER3P56645 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PER3P56645 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.26■□□□□ 0.83
PER3P56645 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.26■□□□□ 0.83
PER3P56645 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PER3P56645 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PER3P56645 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PER3P56645 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PER3P56645 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PER3P56645 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PER3P56645 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.25■□□□□ 0.83
PER3P56645 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.25■□□□□ 0.83
PER3P56645 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PER3P56645 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PER3P56645 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms