Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.88■■□□□ 1.41
PDE6CP51160 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.87■■□□□ 1.41
PDE6CP51160 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6CP51160 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6CP51160 DUX4L19-201ENST00000557448 1267 ntBASIC23.87■■□□□ 1.41
PDE6CP51160 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PDE6CP51160 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PDE6CP51160 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6CP51160 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.87■■□□□ 1.41
PDE6CP51160 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDE6CP51160 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDE6CP51160 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PDE6CP51160 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDE6CP51160 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.86■■□□□ 1.41
PDE6CP51160 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PDE6CP51160 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.85■■□□□ 1.41
PDE6CP51160 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.85■■□□□ 1.41
PDE6CP51160 C1orf229-201ENST00000623686 2258 ntBASIC23.85■■□□□ 1.41
PDE6CP51160 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDE6CP51160 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.85■■□□□ 1.41
PDE6CP51160 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDE6CP51160 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDE6CP51160 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.85■■□□□ 1.41
PDE6CP51160 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDE6CP51160 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDE6CP51160 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.85■■□□□ 1.41
PDE6CP51160 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PDE6CP51160 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6CP51160 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6CP51160 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6CP51160 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.84■■□□□ 1.41
PDE6CP51160 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6CP51160 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6CP51160 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.84■■□□□ 1.41
PDE6CP51160 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6CP51160 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDE6CP51160 AC106739.1-201ENST00000617035 715 ntBASIC23.84■■□□□ 1.41
PDE6CP51160 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.84■■□□□ 1.41
PDE6CP51160 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PDE6CP51160 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDE6CP51160 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.83■■□□□ 1.41
PDE6CP51160 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
PDE6CP51160 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PDE6CP51160 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.83■■□□□ 1.41
PDE6CP51160 AC005837.3-201ENST00000612163 286 ntBASIC23.83■■□□□ 1.41
PDE6CP51160 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.83■■□□□ 1.41
PDE6CP51160 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PDE6CP51160 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDE6CP51160 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.82■■□□□ 1.4
PDE6CP51160 AC009102.2-201ENST00000606772 1639 ntBASIC23.82■■□□□ 1.4
PDE6CP51160 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.82■■□□□ 1.4
PDE6CP51160 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.82■■□□□ 1.4
PDE6CP51160 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.82■■□□□ 1.4
PDE6CP51160 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDE6CP51160 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDE6CP51160 LINC01529-204ENST00000636474 1715 ntBASIC23.81■■□□□ 1.4
PDE6CP51160 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
PDE6CP51160 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.81■■□□□ 1.4
PDE6CP51160 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6CP51160 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.81■■□□□ 1.4
PDE6CP51160 UNC93B3-201ENST00000308076 687 ntBASIC23.81■■□□□ 1.4
PDE6CP51160 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PDE6CP51160 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6CP51160 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.81■■□□□ 1.4
PDE6CP51160 PBX2P1-201ENST00000493219 1291 ntBASIC23.81■■□□□ 1.4
PDE6CP51160 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6CP51160 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PDE6CP51160 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6CP51160 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PDE6CP51160 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDE6CP51160 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6CP51160 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.8■■□□□ 1.4
PDE6CP51160 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.8■■□□□ 1.4
PDE6CP51160 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PDE6CP51160 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6CP51160 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.8■■□□□ 1.4
PDE6CP51160 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6CP51160 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6CP51160 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDE6CP51160 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.8■■□□□ 1.4
PDE6CP51160 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDE6CP51160 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PDE6CP51160 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PDE6CP51160 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.79■■□□□ 1.4
PDE6CP51160 FP325331.1-202ENST00000623531 1380 ntBASIC23.79■■□□□ 1.4
PDE6CP51160 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PDE6CP51160 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDE6CP51160 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDE6CP51160 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.79■■□□□ 1.4
PDE6CP51160 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PDE6CP51160 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDE6CP51160 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PDE6CP51160 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.79■■□□□ 1.4
PDE6CP51160 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.79■■□□□ 1.4
PDE6CP51160 AL136162.1-201ENST00000607711 1078 ntBASIC23.79■■□□□ 1.4
PDE6CP51160 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.79■■□□□ 1.4
PDE6CP51160 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.79■■□□□ 1.4
PDE6CP51160 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDE6CP51160 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDE6CP51160 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms