Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDK7P50613 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CDK7P50613 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
CDK7P50613 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDK7P50613 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDK7P50613 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.67■■□□□ 1.54
CDK7P50613 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CDK7P50613 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.67■■□□□ 1.54
CDK7P50613 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
CDK7P50613 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.67■■□□□ 1.54
CDK7P50613 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.67■■□□□ 1.54
CDK7P50613 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.67■■□□□ 1.54
CDK7P50613 TPRG1LP1-201ENST00000598702 760 ntBASIC24.67■■□□□ 1.54
CDK7P50613 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDK7P50613 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.67■■□□□ 1.54
CDK7P50613 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDK7P50613 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.66■■□□□ 1.54
CDK7P50613 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CDK7P50613 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.66■■□□□ 1.54
CDK7P50613 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
CDK7P50613 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.66■■□□□ 1.54
CDK7P50613 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CDK7P50613 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.65■■□□□ 1.54
CDK7P50613 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CDK7P50613 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.65■■□□□ 1.54
CDK7P50613 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.65■■□□□ 1.54
CDK7P50613 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDK7P50613 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.65■■□□□ 1.54
CDK7P50613 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.65■■□□□ 1.54
CDK7P50613 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.65■■□□□ 1.54
CDK7P50613 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.65■■□□□ 1.54
CDK7P50613 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CDK7P50613 AC137761.2-201ENST00000561729 223 ntBASIC24.65■■□□□ 1.54
CDK7P50613 AC145350.3-201ENST00000569033 163 ntBASIC24.65■■□□□ 1.54
CDK7P50613 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDK7P50613 AP004607.4-201ENST00000530158 1459 ntBASIC24.64■■□□□ 1.54
CDK7P50613 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDK7P50613 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CDK7P50613 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDK7P50613 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDK7P50613 AC016769.1-201ENST00000409132 1010 ntBASIC24.64■■□□□ 1.54
CDK7P50613 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.64■■□□□ 1.54
CDK7P50613 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDK7P50613 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.64■■□□□ 1.54
CDK7P50613 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.64■■□□□ 1.54
CDK7P50613 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.64■■□□□ 1.54
CDK7P50613 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.63■■□□□ 1.53
CDK7P50613 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.63■■□□□ 1.53
CDK7P50613 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.63■■□□□ 1.53
CDK7P50613 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDK7P50613 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.63■■□□□ 1.53
CDK7P50613 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDK7P50613 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDK7P50613 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.62■■□□□ 1.53
CDK7P50613 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.62■■□□□ 1.53
CDK7P50613 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDK7P50613 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDK7P50613 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.62■■□□□ 1.53
CDK7P50613 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDK7P50613 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.62■■□□□ 1.53
CDK7P50613 AC026185.1-201ENST00000445748 174 ntBASIC24.62■■□□□ 1.53
CDK7P50613 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.62■■□□□ 1.53
CDK7P50613 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.62■■□□□ 1.53
CDK7P50613 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK7P50613 LINC01529-204ENST00000636474 1715 ntBASIC24.61■■□□□ 1.53
CDK7P50613 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK7P50613 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK7P50613 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK7P50613 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.61■■□□□ 1.53
CDK7P50613 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.61■■□□□ 1.53
CDK7P50613 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK7P50613 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK7P50613 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.61■■□□□ 1.53
CDK7P50613 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK7P50613 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK7P50613 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK7P50613 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDK7P50613 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDK7P50613 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDK7P50613 AC104771.1-201ENST00000603335 964 ntBASIC24.6■■□□□ 1.53
CDK7P50613 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.6■■□□□ 1.53
CDK7P50613 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDK7P50613 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDK7P50613 AC144652.1-201ENST00000609974 1624 ntBASIC24.6■■□□□ 1.53
CDK7P50613 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDK7P50613 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CDK7P50613 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.59■■□□□ 1.53
CDK7P50613 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDK7P50613 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CDK7P50613 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDK7P50613 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDK7P50613 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDK7P50613 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
CDK7P50613 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CDK7P50613 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.58■■□□□ 1.53
CDK7P50613 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDK7P50613 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.58■■□□□ 1.53
CDK7P50613 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CDK7P50613 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.58■■□□□ 1.53
CDK7P50613 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms