Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLK3P49761 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.89■□□□□ 0.94
CLK3P49761 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLK3P49761 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CLK3P49761 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLK3P49761 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLK3P49761 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.89■□□□□ 0.93
CLK3P49761 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
CLK3P49761 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.89■□□□□ 0.93
CLK3P49761 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLK3P49761 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLK3P49761 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLK3P49761 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLK3P49761 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLK3P49761 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.88■□□□□ 0.93
CLK3P49761 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.88■□□□□ 0.93
CLK3P49761 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.88■□□□□ 0.93
CLK3P49761 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLK3P49761 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLK3P49761 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLK3P49761 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLK3P49761 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLK3P49761 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK3P49761 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK3P49761 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.87■□□□□ 0.93
CLK3P49761 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK3P49761 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK3P49761 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK3P49761 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.87■□□□□ 0.93
CLK3P49761 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK3P49761 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.87■□□□□ 0.93
CLK3P49761 MIR6724-1-201ENST00000616420 92 ntBASIC20.87■□□□□ 0.93
CLK3P49761 MIR6724-2-201ENST00000616483 92 ntBASIC20.87■□□□□ 0.93
CLK3P49761 MIR6724-4-201ENST00000617390 92 ntBASIC20.87■□□□□ 0.93
CLK3P49761 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.87■□□□□ 0.93
CLK3P49761 MIR6724-3-201ENST00000622482 92 ntBASIC20.87■□□□□ 0.93
CLK3P49761 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK3P49761 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK3P49761 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK3P49761 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLK3P49761 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.87■□□□□ 0.93
CLK3P49761 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK3P49761 AC007375.3-201ENST00000600936 2314 ntBASIC20.87■□□□□ 0.93
CLK3P49761 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CLK3P49761 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLK3P49761 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.86■□□□□ 0.93
CLK3P49761 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLK3P49761 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLK3P49761 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.86■□□□□ 0.93
CLK3P49761 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLK3P49761 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.86■□□□□ 0.93
CLK3P49761 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.86■□□□□ 0.93
CLK3P49761 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLK3P49761 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.86■□□□□ 0.93
CLK3P49761 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CLK3P49761 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.86■□□□□ 0.93
CLK3P49761 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLK3P49761 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLK3P49761 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.86■□□□□ 0.93
CLK3P49761 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLK3P49761 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLK3P49761 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLK3P49761 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLK3P49761 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.85■□□□□ 0.93
CLK3P49761 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.85■□□□□ 0.93
CLK3P49761 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CLK3P49761 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLK3P49761 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.85■□□□□ 0.93
CLK3P49761 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLK3P49761 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLK3P49761 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.85■□□□□ 0.93
CLK3P49761 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLK3P49761 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLK3P49761 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLK3P49761 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLK3P49761 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLK3P49761 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLK3P49761 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.84■□□□□ 0.93
CLK3P49761 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLK3P49761 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CLK3P49761 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.84■□□□□ 0.93
CLK3P49761 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLK3P49761 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.84■□□□□ 0.93
CLK3P49761 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.84■□□□□ 0.93
CLK3P49761 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CLK3P49761 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLK3P49761 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CLK3P49761 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLK3P49761 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CLK3P49761 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLK3P49761 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLK3P49761 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.83■□□□□ 0.93
CLK3P49761 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.83■□□□□ 0.93
CLK3P49761 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CLK3P49761 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CLK3P49761 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLK3P49761 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.82■□□□□ 0.92
CLK3P49761 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CLK3P49761 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLK3P49761 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms