Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.45■■□□□ 1.02
SLC6A12P48065 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A12P48065 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A12P48065 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC6A12P48065 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC6A12P48065 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.45■■□□□ 1.02
SLC6A12P48065 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.45■■□□□ 1.02
SLC6A12P48065 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC6A12P48065 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A12P48065 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A12P48065 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A12P48065 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.45■■□□□ 1.02
SLC6A12P48065 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.44■■□□□ 1.02
SLC6A12P48065 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A12P48065 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.44■■□□□ 1.02
SLC6A12P48065 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A12P48065 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A12P48065 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 AC087742.1-201ENST00000575880 1738 ntBASIC21.43■■□□□ 1.02
SLC6A12P48065 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 AC127496.7-201ENST00000625110 1798 ntBASIC21.43■■□□□ 1.02
SLC6A12P48065 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 GUSBP5-202ENST00000510805 1989 ntBASIC21.43■■□□□ 1.02
SLC6A12P48065 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SLC6A12P48065 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.43■■□□□ 1.02
SLC6A12P48065 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.43■■□□□ 1.02
SLC6A12P48065 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A12P48065 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SLC6A12P48065 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.42■■□□□ 1.02
SLC6A12P48065 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC6A12P48065 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC6A12P48065 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC6A12P48065 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC6A12P48065 AC006455.2-201ENST00000429931 906 ntBASIC21.42■■□□□ 1.02
SLC6A12P48065 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SLC6A12P48065 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC6A12P48065 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC6A12P48065 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC6A12P48065 AC004687.1-201ENST00000579003 1625 ntBASIC21.42■■□□□ 1.02
SLC6A12P48065 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A12P48065 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A12P48065 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A12P48065 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A12P48065 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SLC6A12P48065 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A12P48065 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC6A12P48065 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A12P48065 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A12P48065 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A12P48065 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A12P48065 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.41■■□□□ 1.02
SLC6A12P48065 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SLC6A12P48065 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A12P48065 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A12P48065 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.41■■□□□ 1.02
SLC6A12P48065 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC6A12P48065 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SLC6A12P48065 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A12P48065 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC6A12P48065 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A12P48065 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A12P48065 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A12P48065 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC6A12P48065 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC6A12P48065 AC099791.2-201ENST00000605725 427 ntBASIC21.4■■□□□ 1.02
SLC6A12P48065 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC6A12P48065 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A12P48065 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A12P48065 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC6A12P48065 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SLC6A12P48065 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC6A12P48065 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC6A12P48065 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC6A12P48065 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC6A12P48065 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC6A12P48065 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC6A12P48065 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC6A12P48065 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC6A12P48065 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.39■■□□□ 1.01
SLC6A12P48065 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC6A12P48065 AC079834.2-201ENST00000609776 1949 ntBASIC21.39■■□□□ 1.01
SLC6A12P48065 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC6A12P48065 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC6A12P48065 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC6A12P48065 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.38■■□□□ 1.01
SLC6A12P48065 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SLC6A12P48065 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SLC6A12P48065 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC6A12P48065 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC6A12P48065 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms