Protein–RNA interactions for Protein: P47992

XCL1, Lymphotactin, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1P47992 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XCL1P47992 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
XCL1P47992 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
XCL1P47992 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.15■□□□□ 0.02
XCL1P47992 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.15■□□□□ 0.02
XCL1P47992 MIR4508-201ENST00000584178 70 ntBASIC15.15■□□□□ 0.02
XCL1P47992 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
XCL1P47992 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
XCL1P47992 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
XCL1P47992 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
XCL1P47992 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
XCL1P47992 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
XCL1P47992 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
XCL1P47992 AL353803.4-201ENST00000565882 1934 ntBASIC15.14■□□□□ 0.01
XCL1P47992 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
XCL1P47992 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
XCL1P47992 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
XCL1P47992 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.14■□□□□ 0.01
XCL1P47992 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
XCL1P47992 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
XCL1P47992 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
XCL1P47992 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
XCL1P47992 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
XCL1P47992 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.14■□□□□ 0.01
XCL1P47992 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.13■□□□□ 0.01
XCL1P47992 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.13■□□□□ 0.01
XCL1P47992 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.13■□□□□ 0.01
XCL1P47992 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
XCL1P47992 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
XCL1P47992 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.13■□□□□ 0.01
XCL1P47992 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.13■□□□□ 0.01
XCL1P47992 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
XCL1P47992 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XCL1P47992 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XCL1P47992 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.12■□□□□ 0.01
XCL1P47992 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.12■□□□□ 0.01
XCL1P47992 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
XCL1P47992 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XCL1P47992 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XCL1P47992 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
XCL1P47992 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XCL1P47992 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
XCL1P47992 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
XCL1P47992 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XCL1P47992 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
XCL1P47992 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
XCL1P47992 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XCL1P47992 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.11■□□□□ 0.01
XCL1P47992 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.11■□□□□ 0.01
XCL1P47992 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.11■□□□□ 0.01
XCL1P47992 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
XCL1P47992 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XCL1P47992 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.11■□□□□ 0.01
XCL1P47992 LINC00565-201ENST00000562710 2331 ntBASIC15.11■□□□□ 0.01
XCL1P47992 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XCL1P47992 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
XCL1P47992 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.11■□□□□ 0.01
XCL1P47992 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
XCL1P47992 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
XCL1P47992 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
XCL1P47992 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.1■□□□□ 0.01
XCL1P47992 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XCL1P47992 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
XCL1P47992 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XCL1P47992 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.1■□□□□ 0.01
XCL1P47992 AC103834.1-201ENST00000520383 144 ntBASIC15.1■□□□□ 0.01
XCL1P47992 AC103724.3-201ENST00000564481 992 ntBASIC15.1■□□□□ 0.01
XCL1P47992 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.1■□□□□ 0.01
XCL1P47992 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.1■□□□□ 0.01
XCL1P47992 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.1■□□□□ 0.01
XCL1P47992 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.1■□□□□ 0.01
XCL1P47992 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.1■□□□□ 0.01
XCL1P47992 LINC00526-201ENST00000581067 1875 ntBASIC15.1■□□□□ 0.01
XCL1P47992 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XCL1P47992 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XCL1P47992 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
XCL1P47992 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
XCL1P47992 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
XCL1P47992 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
XCL1P47992 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.09■□□□□ 0.01
XCL1P47992 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
XCL1P47992 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
XCL1P47992 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.09■□□□□ 0.01
XCL1P47992 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
XCL1P47992 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
XCL1P47992 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
XCL1P47992 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms