Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC004687.1-201ENST00000579003 1625 ntBASIC22.11■■□□□ 1.13
HMGCLP35914 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
HMGCLP35914 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HMGCLP35914 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.11■■□□□ 1.13
HMGCLP35914 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HMGCLP35914 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
HMGCLP35914 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
HMGCLP35914 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
HMGCLP35914 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HMGCLP35914 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.1■■□□□ 1.13
HMGCLP35914 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.1■■□□□ 1.13
HMGCLP35914 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HMGCLP35914 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.1■■□□□ 1.13
HMGCLP35914 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HMGCLP35914 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HMGCLP35914 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
HMGCLP35914 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.1■■□□□ 1.13
HMGCLP35914 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.1■■□□□ 1.13
HMGCLP35914 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HMGCLP35914 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.1■■□□□ 1.13
HMGCLP35914 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HMGCLP35914 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
HMGCLP35914 AC136469.2-201ENST00000623944 1028 ntBASIC22.1■■□□□ 1.13
HMGCLP35914 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.1■■□□□ 1.13
HMGCLP35914 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.1■■□□□ 1.13
HMGCLP35914 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.1■■□□□ 1.13
HMGCLP35914 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
HMGCLP35914 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HMGCLP35914 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
HMGCLP35914 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
HMGCLP35914 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
HMGCLP35914 AC096631.2-201ENST00000436136 790 ntBASIC22.09■■□□□ 1.13
HMGCLP35914 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.09■■□□□ 1.13
HMGCLP35914 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
HMGCLP35914 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HMGCLP35914 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
HMGCLP35914 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.09■■□□□ 1.13
HMGCLP35914 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
HMGCLP35914 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.09■■□□□ 1.13
HMGCLP35914 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
HMGCLP35914 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
HMGCLP35914 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
HMGCLP35914 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HMGCLP35914 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HMGCLP35914 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.08■■□□□ 1.13
HMGCLP35914 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
HMGCLP35914 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.08■■□□□ 1.13
HMGCLP35914 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.08■■□□□ 1.13
HMGCLP35914 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HMGCLP35914 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
HMGCLP35914 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
HMGCLP35914 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HMGCLP35914 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HMGCLP35914 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.07■■□□□ 1.12
HMGCLP35914 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HMGCLP35914 AL136162.1-201ENST00000607711 1078 ntBASIC22.07■■□□□ 1.12
HMGCLP35914 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HMGCLP35914 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
HMGCLP35914 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HMGCLP35914 AC068473.5-201ENST00000616428 2072 ntBASIC22.07■■□□□ 1.12
HMGCLP35914 AC135279.3-201ENST00000610945 1311 ntBASIC22.06■■□□□ 1.12
HMGCLP35914 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HMGCLP35914 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGCLP35914 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGCLP35914 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.06■■□□□ 1.12
HMGCLP35914 AC110285.6-201ENST00000617652 491 ntBASIC22.06■■□□□ 1.12
HMGCLP35914 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.06■■□□□ 1.12
HMGCLP35914 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGCLP35914 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HMGCLP35914 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.06■■□□□ 1.12
HMGCLP35914 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HMGCLP35914 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGCLP35914 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.06■■□□□ 1.12
HMGCLP35914 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HMGCLP35914 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HMGCLP35914 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HMGCLP35914 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.05■■□□□ 1.12
HMGCLP35914 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HMGCLP35914 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
HMGCLP35914 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HMGCLP35914 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.05■■□□□ 1.12
HMGCLP35914 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
HMGCLP35914 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.05■■□□□ 1.12
HMGCLP35914 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
HMGCLP35914 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.05■■□□□ 1.12
HMGCLP35914 AC024257.2-201ENST00000549699 147 ntBASIC22.05■■□□□ 1.12
HMGCLP35914 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.05■■□□□ 1.12
HMGCLP35914 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.05■■□□□ 1.12
HMGCLP35914 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HMGCLP35914 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HMGCLP35914 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HMGCLP35914 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.04■■□□□ 1.12
HMGCLP35914 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HMGCLP35914 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.04■■□□□ 1.12
HMGCLP35914 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.04■■□□□ 1.12
HMGCLP35914 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
HMGCLP35914 OR2I1P-207ENST00000453522 948 ntBASIC22.04■■□□□ 1.12
HMGCLP35914 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.04■■□□□ 1.12
HMGCLP35914 AC106739.1-201ENST00000617035 715 ntBASIC22.04■■□□□ 1.12
HMGCLP35914 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms