Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.56■□□□□ 0.72
HOXC12P31275 pRNA.6-201ENST00000610482 90 ntBASIC19.56■□□□□ 0.72
HOXC12P31275 pRNA.5-201ENST00000612139 90 ntBASIC19.56■□□□□ 0.72
HOXC12P31275 AC011298.3-201ENST00000615796 283 ntBASIC19.56■□□□□ 0.72
HOXC12P31275 pRNA.11-201ENST00000618423 90 ntBASIC19.56■□□□□ 0.72
HOXC12P31275 pRNA.13-201ENST00000619112 90 ntBASIC19.56■□□□□ 0.72
HOXC12P31275 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC12P31275 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXC12P31275 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXC12P31275 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
HOXC12P31275 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC12P31275 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXC12P31275 AC006455.2-201ENST00000429931 906 ntBASIC19.55■□□□□ 0.72
HOXC12P31275 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC12P31275 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC12P31275 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC12P31275 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC12P31275 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC12P31275 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC12P31275 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC12P31275 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
HOXC12P31275 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC12P31275 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
HOXC12P31275 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC12P31275 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXC12P31275 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC12P31275 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXC12P31275 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC12P31275 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXC12P31275 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC12P31275 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC12P31275 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HOXC12P31275 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC12P31275 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HOXC12P31275 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC12P31275 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.54■□□□□ 0.72
HOXC12P31275 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC12P31275 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
HOXC12P31275 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
HOXC12P31275 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC12P31275 IRS3P-201ENST00000223076 1006 ntBASIC19.53■□□□□ 0.72
HOXC12P31275 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC12P31275 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXC12P31275 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC12P31275 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC12P31275 AC027682.1-201ENST00000562846 899 ntBASIC19.53■□□□□ 0.72
HOXC12P31275 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXC12P31275 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXC12P31275 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC12P31275 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC12P31275 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC12P31275 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC12P31275 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC12P31275 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXC12P31275 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC12P31275 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC12P31275 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
HOXC12P31275 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC12P31275 DUX4L4-201ENST00000566884 1269 ntBASIC19.52■□□□□ 0.72
HOXC12P31275 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HOXC12P31275 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HOXC12P31275 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
HOXC12P31275 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HOXC12P31275 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.52■□□□□ 0.71
HOXC12P31275 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.51■□□□□ 0.71
HOXC12P31275 AC079630.1-202ENST00000618127 1840 ntBASIC19.51■□□□□ 0.71
HOXC12P31275 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC12P31275 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC12P31275 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC12P31275 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
HOXC12P31275 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC12P31275 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC12P31275 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.51■□□□□ 0.71
HOXC12P31275 MIR3181-201ENST00000578512 73 ntBASIC19.51■□□□□ 0.71
HOXC12P31275 RARRES2P11-201ENST00000635158 484 ntBASIC19.51■□□□□ 0.71
HOXC12P31275 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
HOXC12P31275 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
HOXC12P31275 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC12P31275 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC12P31275 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC12P31275 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HOXC12P31275 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC12P31275 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.5■□□□□ 0.71
HOXC12P31275 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC12P31275 AC090192.1-201ENST00000517740 490 ntBASIC19.5■□□□□ 0.71
HOXC12P31275 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.5■□□□□ 0.71
HOXC12P31275 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC12P31275 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC12P31275 AC136469.2-201ENST00000623944 1028 ntBASIC19.5■□□□□ 0.71
HOXC12P31275 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC12P31275 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.5■□□□□ 0.71
HOXC12P31275 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HOXC12P31275 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.49■□□□□ 0.71
HOXC12P31275 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC12P31275 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HOXC12P31275 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.49■□□□□ 0.71
HOXC12P31275 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.49■□□□□ 0.71
HOXC12P31275 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC12P31275 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC12P31275 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms