Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
CHMP24386 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.63■□□□□ 0.89
CHMP24386 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.63■□□□□ 0.89
CHMP24386 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.63■□□□□ 0.89
CHMP24386 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.63■□□□□ 0.89
CHMP24386 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.63■□□□□ 0.89
CHMP24386 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 AC137767.1-201ENST00000602918 1920 ntBASIC20.63■□□□□ 0.89
CHMP24386 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP24386 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP24386 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CHMP24386 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP24386 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP24386 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP24386 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP24386 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.62■□□□□ 0.89
CHMP24386 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.62■□□□□ 0.89
CHMP24386 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.62■□□□□ 0.89
CHMP24386 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP24386 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP24386 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP24386 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.61■□□□□ 0.89
CHMP24386 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP24386 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHMP24386 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP24386 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHMP24386 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP24386 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP24386 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMP24386 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHMP24386 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP24386 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP24386 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP24386 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP24386 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP24386 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP24386 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP24386 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHMP24386 AC131281.2-201ENST00000520478 145 ntBASIC20.6■□□□□ 0.89
CHMP24386 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP24386 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP24386 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP24386 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHMP24386 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHMP24386 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHMP24386 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP24386 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP24386 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP24386 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP24386 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP24386 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHMP24386 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMP24386 ALDH1A3-203ENST00000557963 1670 ntBASIC20.59■□□□□ 0.89
CHMP24386 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CHMP24386 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP24386 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.59■□□□□ 0.89
CHMP24386 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP24386 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP24386 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP24386 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP24386 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP24386 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP24386 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP24386 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP24386 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP24386 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP24386 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP24386 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP24386 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP24386 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP24386 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CHMP24386 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.58■□□□□ 0.88
CHMP24386 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CHMP24386 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP24386 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP24386 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP24386 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP24386 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHMP24386 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP24386 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP24386 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP24386 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP24386 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP24386 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHMP24386 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP24386 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms