Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC087742.1-201ENST00000575880 1738 ntBASIC20.56■□□□□ 0.88
TNFRSF1BP20333 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF1BP20333 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TNFRSF1BP20333 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
TNFRSF1BP20333 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF1BP20333 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF1BP20333 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF1BP20333 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 AC092053.2-201ENST00000640557 1818 ntBASIC20.53■□□□□ 0.88
TNFRSF1BP20333 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF1BP20333 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 AL137060.1-201ENST00000618151 2648 ntBASIC20.52■□□□□ 0.88
TNFRSF1BP20333 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 YBX1P4-201ENST00000392794 808 ntBASIC20.52■□□□□ 0.88
TNFRSF1BP20333 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TNFRSF1BP20333 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TNFRSF1BP20333 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF1BP20333 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF1BP20333 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TNFRSF1BP20333 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF1BP20333 C11orf96-202ENST00000528572 1834 ntBASIC20.51■□□□□ 0.87
TNFRSF1BP20333 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.51■□□□□ 0.87
TNFRSF1BP20333 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF1BP20333 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.51■□□□□ 0.87
TNFRSF1BP20333 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFRSF1BP20333 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF1BP20333 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.51■□□□□ 0.87
TNFRSF1BP20333 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF1BP20333 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFRSF1BP20333 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFRSF1BP20333 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF1BP20333 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF1BP20333 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFRSF1BP20333 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFRSF1BP20333 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF1BP20333 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TNFRSF1BP20333 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.5■□□□□ 0.87
TNFRSF1BP20333 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF1BP20333 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF1BP20333 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
TNFRSF1BP20333 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF1BP20333 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF1BP20333 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF1BP20333 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFRSF1BP20333 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFRSF1BP20333 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFRSF1BP20333 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.49■□□□□ 0.87
TNFRSF1BP20333 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TNFRSF1BP20333 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF1BP20333 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms