Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.31■□□□□ 0.68
SRMP19623 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRMP19623 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRMP19623 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.31■□□□□ 0.68
SRMP19623 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.31■□□□□ 0.68
SRMP19623 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRMP19623 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRMP19623 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRMP19623 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SRMP19623 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.31■□□□□ 0.68
SRMP19623 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRMP19623 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRMP19623 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRMP19623 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SRMP19623 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRMP19623 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRMP19623 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRMP19623 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRMP19623 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.3■□□□□ 0.68
SRMP19623 AC004448.1-201ENST00000458332 883 ntBASIC19.3■□□□□ 0.68
SRMP19623 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRMP19623 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.3■□□□□ 0.68
SRMP19623 AC129492.7-201ENST00000622992 756 ntBASIC19.3■□□□□ 0.68
SRMP19623 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.3■□□□□ 0.68
SRMP19623 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRMP19623 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRMP19623 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.29■□□□□ 0.68
SRMP19623 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRMP19623 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRMP19623 AF131216.4-201ENST00000638924 1588 ntBASIC19.29■□□□□ 0.68
SRMP19623 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.29■□□□□ 0.68
SRMP19623 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.29■□□□□ 0.68
SRMP19623 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.29■□□□□ 0.68
SRMP19623 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.29■□□□□ 0.68
SRMP19623 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRMP19623 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRMP19623 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRMP19623 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SRMP19623 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRMP19623 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SRMP19623 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRMP19623 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRMP19623 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRMP19623 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SRMP19623 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRMP19623 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.28■□□□□ 0.68
SRMP19623 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRMP19623 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRMP19623 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.28■□□□□ 0.68
SRMP19623 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
SRMP19623 AC026310.3-201ENST00000625186 2373 ntBASIC19.28■□□□□ 0.68
SRMP19623 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.27■□□□□ 0.68
SRMP19623 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRMP19623 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
SRMP19623 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.27■□□□□ 0.68
SRMP19623 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.27■□□□□ 0.68
SRMP19623 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRMP19623 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.27■□□□□ 0.68
SRMP19623 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRMP19623 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SRMP19623 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SRMP19623 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRMP19623 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.27■□□□□ 0.68
SRMP19623 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRMP19623 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRMP19623 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRMP19623 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.27■□□□□ 0.67
SRMP19623 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.27■□□□□ 0.67
SRMP19623 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRMP19623 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.27■□□□□ 0.67
SRMP19623 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRMP19623 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRMP19623 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRMP19623 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRMP19623 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRMP19623 AC144652.1-201ENST00000609974 1624 ntBASIC19.26■□□□□ 0.67
SRMP19623 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRMP19623 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.26■□□□□ 0.67
SRMP19623 AC120024.1-201ENST00000562672 995 ntBASIC19.26■□□□□ 0.67
SRMP19623 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
SRMP19623 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRMP19623 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SRMP19623 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRMP19623 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.25■□□□□ 0.67
SRMP19623 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.25■□□□□ 0.67
SRMP19623 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRMP19623 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRMP19623 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRMP19623 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SRMP19623 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.25■□□□□ 0.67
SRMP19623 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRMP19623 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.25■□□□□ 0.67
SRMP19623 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRMP19623 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRMP19623 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRMP19623 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRMP19623 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.24■□□□□ 0.67
SRMP19623 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRMP19623 U85056.1-201ENST00000616429 682 ntBASIC19.24■□□□□ 0.67
SRMP19623 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms