Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BMP4P12644 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.17■□□□□ 0.82
BMP4P12644 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.17■□□□□ 0.82
BMP4P12644 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BMP4P12644 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.17■□□□□ 0.82
BMP4P12644 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.17■□□□□ 0.82
BMP4P12644 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
BMP4P12644 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
BMP4P12644 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BMP4P12644 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BMP4P12644 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.17■□□□□ 0.82
BMP4P12644 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
BMP4P12644 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BMP4P12644 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
BMP4P12644 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BMP4P12644 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
BMP4P12644 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.16■□□□□ 0.82
BMP4P12644 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.16■□□□□ 0.82
BMP4P12644 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BMP4P12644 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
BMP4P12644 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BMP4P12644 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BMP4P12644 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.15■□□□□ 0.82
BMP4P12644 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BMP4P12644 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
BMP4P12644 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BMP4P12644 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.15■□□□□ 0.82
BMP4P12644 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BMP4P12644 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.15■□□□□ 0.82
BMP4P12644 AC021242.3-201ENST00000607598 1377 ntBASIC20.15■□□□□ 0.82
BMP4P12644 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
BMP4P12644 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
BMP4P12644 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.15■□□□□ 0.82
BMP4P12644 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BMP4P12644 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.15■□□□□ 0.82
BMP4P12644 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BMP4P12644 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
BMP4P12644 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
BMP4P12644 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
BMP4P12644 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.14■□□□□ 0.81
BMP4P12644 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.14■□□□□ 0.81
BMP4P12644 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BMP4P12644 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
BMP4P12644 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BMP4P12644 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BMP4P12644 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.14■□□□□ 0.81
BMP4P12644 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
BMP4P12644 KRT16P3-201ENST00000439127 1283 ntBASIC20.14■□□□□ 0.81
BMP4P12644 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.14■□□□□ 0.81
BMP4P12644 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.14■□□□□ 0.81
BMP4P12644 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.14■□□□□ 0.81
BMP4P12644 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BMP4P12644 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.14■□□□□ 0.81
BMP4P12644 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
BMP4P12644 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.13■□□□□ 0.81
BMP4P12644 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.13■□□□□ 0.81
BMP4P12644 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BMP4P12644 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.13■□□□□ 0.81
BMP4P12644 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
BMP4P12644 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
BMP4P12644 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BMP4P12644 MIR4281-201ENST00000580852 62 ntBASIC20.13■□□□□ 0.81
BMP4P12644 RNF165-205ENST00000588679 2904 ntBASIC20.13■□□□□ 0.81
BMP4P12644 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
BMP4P12644 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.13■□□□□ 0.81
BMP4P12644 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.13■□□□□ 0.81
BMP4P12644 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.13■□□□□ 0.81
BMP4P12644 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BMP4P12644 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BMP4P12644 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BMP4P12644 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BMP4P12644 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BMP4P12644 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BMP4P12644 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
BMP4P12644 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BMP4P12644 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BMP4P12644 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.12■□□□□ 0.81
BMP4P12644 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.12■□□□□ 0.81
BMP4P12644 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BMP4P12644 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
BMP4P12644 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.12■□□□□ 0.81
BMP4P12644 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.12■□□□□ 0.81
BMP4P12644 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BMP4P12644 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BMP4P12644 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BMP4P12644 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BMP4P12644 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
BMP4P12644 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BMP4P12644 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
BMP4P12644 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BMP4P12644 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
BMP4P12644 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BMP4P12644 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BMP4P12644 AC092028.1-203ENST00000608262 953 ntBASIC20.11■□□□□ 0.81
BMP4P12644 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.11■□□□□ 0.81
BMP4P12644 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.11■□□□□ 0.81
BMP4P12644 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BMP4P12644 FBXW4P1-201ENST00000426721 2239 ntBASIC20.11■□□□□ 0.81
BMP4P12644 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BMP4P12644 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms