Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSIG8P0DPA2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
VSIG8P0DPA2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.96■□□□□ 0.63
VSIG8P0DPA2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSIG8P0DPA2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSIG8P0DPA2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSIG8P0DPA2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.95■□□□□ 0.62
VSIG8P0DPA2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSIG8P0DPA2 ATP5G2P3-201ENST00000429083 425 ntBASIC18.95■□□□□ 0.62
VSIG8P0DPA2 AC010980.1-201ENST00000587192 1142 ntBASIC18.95■□□□□ 0.62
VSIG8P0DPA2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VSIG8P0DPA2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.95■□□□□ 0.62
VSIG8P0DPA2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSIG8P0DPA2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.95■□□□□ 0.62
VSIG8P0DPA2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSIG8P0DPA2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VSIG8P0DPA2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VSIG8P0DPA2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSIG8P0DPA2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSIG8P0DPA2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSIG8P0DPA2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSIG8P0DPA2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSIG8P0DPA2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSIG8P0DPA2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.94■□□□□ 0.62
VSIG8P0DPA2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.94■□□□□ 0.62
VSIG8P0DPA2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSIG8P0DPA2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSIG8P0DPA2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSIG8P0DPA2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VSIG8P0DPA2 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.93■□□□□ 0.62
VSIG8P0DPA2 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.93■□□□□ 0.62
VSIG8P0DPA2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VSIG8P0DPA2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VSIG8P0DPA2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
VSIG8P0DPA2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSIG8P0DPA2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.93■□□□□ 0.62
VSIG8P0DPA2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.93■□□□□ 0.62
VSIG8P0DPA2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSIG8P0DPA2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.93■□□□□ 0.62
VSIG8P0DPA2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.92■□□□□ 0.62
VSIG8P0DPA2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VSIG8P0DPA2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
VSIG8P0DPA2 SNX5-217ENST00000606557 1087 ntBASIC18.92■□□□□ 0.62
VSIG8P0DPA2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
VSIG8P0DPA2 AL137060.1-201ENST00000618151 2648 ntBASIC18.92■□□□□ 0.62
VSIG8P0DPA2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VSIG8P0DPA2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VSIG8P0DPA2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VSIG8P0DPA2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VSIG8P0DPA2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSIG8P0DPA2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSIG8P0DPA2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VSIG8P0DPA2 FBXW4P1-201ENST00000426721 2239 ntBASIC18.91■□□□□ 0.62
VSIG8P0DPA2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSIG8P0DPA2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.91■□□□□ 0.62
VSIG8P0DPA2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSIG8P0DPA2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
VSIG8P0DPA2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VSIG8P0DPA2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSIG8P0DPA2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.9■□□□□ 0.62
VSIG8P0DPA2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
VSIG8P0DPA2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.89■□□□□ 0.62
VSIG8P0DPA2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VSIG8P0DPA2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSIG8P0DPA2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VSIG8P0DPA2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
VSIG8P0DPA2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VSIG8P0DPA2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.88■□□□□ 0.61
VSIG8P0DPA2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.88■□□□□ 0.61
VSIG8P0DPA2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VSIG8P0DPA2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.88■□□□□ 0.61
VSIG8P0DPA2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.88■□□□□ 0.61
VSIG8P0DPA2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VSIG8P0DPA2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VSIG8P0DPA2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
VSIG8P0DPA2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms