Protein–RNA interactions for Protein: P0DJI8

SAA1, Serum amyloid A-1 protein, humanhuman

Predicted RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1P0DJI8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SAA1P0DJI8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SAA1P0DJI8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SAA1P0DJI8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SAA1P0DJI8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SAA1P0DJI8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
SAA1P0DJI8 AC009102.2-201ENST00000606772 1639 ntBASIC17.81■□□□□ 0.44
SAA1P0DJI8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SAA1P0DJI8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.81■□□□□ 0.44
SAA1P0DJI8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.81■□□□□ 0.44
SAA1P0DJI8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SAA1P0DJI8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SAA1P0DJI8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SAA1P0DJI8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SAA1P0DJI8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SAA1P0DJI8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SAA1P0DJI8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SAA1P0DJI8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SAA1P0DJI8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SAA1P0DJI8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SAA1P0DJI8 LINC00526-201ENST00000581067 1875 ntBASIC17.8■□□□□ 0.44
SAA1P0DJI8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.8■□□□□ 0.44
SAA1P0DJI8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.8■□□□□ 0.44
SAA1P0DJI8 AC127496.7-201ENST00000625110 1798 ntBASIC17.8■□□□□ 0.44
SAA1P0DJI8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.8■□□□□ 0.44
SAA1P0DJI8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SAA1P0DJI8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SAA1P0DJI8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SAA1P0DJI8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SAA1P0DJI8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SAA1P0DJI8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SAA1P0DJI8 AC242852.2-201ENST00000615738 1807 ntBASIC17.79■□□□□ 0.44
SAA1P0DJI8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA1P0DJI8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA1P0DJI8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA1P0DJI8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.79■□□□□ 0.44
SAA1P0DJI8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.79■□□□□ 0.44
SAA1P0DJI8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SAA1P0DJI8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA1P0DJI8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA1P0DJI8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA1P0DJI8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA1P0DJI8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA1P0DJI8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.78■□□□□ 0.44
SAA1P0DJI8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SAA1P0DJI8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SAA1P0DJI8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA1P0DJI8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.78■□□□□ 0.44
SAA1P0DJI8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SAA1P0DJI8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SAA1P0DJI8 DUX4L4-201ENST00000566884 1269 ntBASIC17.78■□□□□ 0.44
SAA1P0DJI8 AC009086.3-201ENST00000623486 1008 ntBASIC17.78■□□□□ 0.44
SAA1P0DJI8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SAA1P0DJI8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA1P0DJI8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA1P0DJI8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.78■□□□□ 0.44
SAA1P0DJI8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.78■□□□□ 0.44
SAA1P0DJI8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SAA1P0DJI8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SAA1P0DJI8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SAA1P0DJI8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SAA1P0DJI8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SAA1P0DJI8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.77■□□□□ 0.44
SAA1P0DJI8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SAA1P0DJI8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SAA1P0DJI8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.77■□□□□ 0.44
SAA1P0DJI8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SAA1P0DJI8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SAA1P0DJI8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SAA1P0DJI8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
SAA1P0DJI8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SAA1P0DJI8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA1P0DJI8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SAA1P0DJI8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA1P0DJI8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SAA1P0DJI8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA1P0DJI8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.76■□□□□ 0.43
SAA1P0DJI8 UNC93B8-201ENST00000511903 705 ntBASIC17.76■□□□□ 0.43
SAA1P0DJI8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA1P0DJI8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA1P0DJI8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.76■□□□□ 0.43
SAA1P0DJI8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA1P0DJI8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SAA1P0DJI8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA1P0DJI8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SAA1P0DJI8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SAA1P0DJI8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SAA1P0DJI8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA1P0DJI8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
SAA1P0DJI8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.75■□□□□ 0.43
SAA1P0DJI8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SAA1P0DJI8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SAA1P0DJI8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SAA1P0DJI8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.75■□□□□ 0.43
SAA1P0DJI8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA1P0DJI8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.75■□□□□ 0.43
SAA1P0DJI8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA1P0DJI8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA1P0DJI8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SAA1P0DJI8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms