Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 HAC1YFL031W 717 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 CNN1YFR046C 1086 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 RPF1YHR088W 888 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 YKL115CYKL115C 393 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 YLR154W-FYLR154W-F 141 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 COQ9YLR201C 783 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 RNA1YMR235C 1224 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 RKI1YOR095C 777 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 NHP6BYBR089C-A 300 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 PRP31YGR091W 1485 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 RTK1YDL025C 1863 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 MSN4YKL062W 1893 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 MDL1YLR188W 2088 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 TRP5YGL026C 2124 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 CNE1YAL058W 1509 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 EXG1YLR300W 1347 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 GPA2YER020W 1350 nt5.42□□□□□ -1.54
TY1A-ER1P0CX71 RUD3YOR216C 1455 nt5.41□□□□□ -1.54
TY1A-ER1P0CX71 snR84snR84 550 nt5.41□□□□□ -1.54
TY1A-ER1P0CX71 PDE1YGL248W 1110 nt5.41□□□□□ -1.54
TY1A-ER1P0CX71 YHR180WYHR180W 492 nt5.41□□□□□ -1.54
TY1A-ER1P0CX71 CAP1YKL007W 807 nt5.41□□□□□ -1.54
TY1A-ER1P0CX71 MRP49YKL167C 414 nt5.41□□□□□ -1.54
TY1A-ER1P0CX71 YSF3YNL138W-A 258 nt5.41□□□□□ -1.54
TY1A-ER1P0CX71 GIM3YNL153C 390 nt5.41□□□□□ -1.54
TY1A-ER1P0CX71 STP22YCL008C 1158 nt5.41□□□□□ -1.54
TY1A-ER1P0CX71 TAX4YJL083W 1815 nt5.41□□□□□ -1.54
TY1A-ER1P0CX71 EPS1YIL005W 2106 nt5.41□□□□□ -1.54
TY1A-ER1P0CX71 CDC37YDR168W 1521 nt5.4□□□□□ -1.54
TY1A-ER1P0CX71 THG1YGR024C 714 nt5.4□□□□□ -1.54
TY1A-ER1P0CX71 GTF1YGR102C 552 nt5.4□□□□□ -1.54
TY1A-ER1P0CX71 YKL023WYKL023W 834 nt5.4□□□□□ -1.54
TY1A-ER1P0CX71 JLP1YLL057C 1239 nt5.4□□□□□ -1.54
TY1A-ER1P0CX71 CDC123YLR215C 1083 nt5.4□□□□□ -1.54
TY1A-ER1P0CX71 ELO3YLR372W 1038 nt5.4□□□□□ -1.54
TY1A-ER1P0CX71 YNL277W-AYNL277W-A 189 nt5.4□□□□□ -1.54
TY1A-ER1P0CX71 COS1YNL336W 1146 nt5.4□□□□□ -1.54
TY1A-ER1P0CX71 TDA3YHR009C 1572 nt5.4□□□□□ -1.55
TY1A-ER1P0CX71 NOP2YNL061W 1857 nt5.4□□□□□ -1.55
TY1A-ER1P0CX71 TNA1YGR260W 1605 nt5.4□□□□□ -1.55
TY1A-ER1P0CX71 FLC3YGL139W 2409 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 CDC1YDR182W 1476 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 CTS2YDR371W 1536 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 MMT1YMR177W 1533 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 YER158W-AYER158W-A 216 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 YVH1YIR026C 1095 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 PET130YJL023C 1044 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 QCR8YJL166W 285 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 RCL1YOL010W 1104 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 YPL250W-AYPL250W-A 288 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 YFL002W-BYFL002W-B 1317 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 YGR161W-AYGR161W-A 1317 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 YBL100W-AYBL100W-A 1317 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 YCL020WYCL020W 1317 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 ENT1YDL161W 1365 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 FPK1YNR047W 2682 nt5.39□□□□□ -1.55
TY1A-ER1P0CX71 PLB2YMR006C 2121 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 GCD1YOR260W 1737 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 YDL012CYDL012C 324 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 ERD1YDR414C 1089 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 GUK1YDR454C 564 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 DIG2YDR480W 972 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 UBC8YEL012W 657 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 RAD51YER095W 1203 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 AGX1YFL030W 1158 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 YGR114CYGR114C 390 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 YJL028WYJL028W 336 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 VMA5YKL080W 1179 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 YKL107WYKL107W 930 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 YLR157W-EYLR157W-E 165 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 YNR005CYNR005C 405 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 TRS33YOR115C 807 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 RCN2YOR220W 798 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 MFM1YPL060W 1242 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 PRM3YPL192C 402 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 OXR1YPL196W 822 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 SMX3YPR182W 261 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 YCL049CYCL049C 939 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 MFB1YDR219C 1398 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 YAP1801YHR161C 1914 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 SLT2YHR030C 1455 nt5.38□□□□□ -1.55
TY1A-ER1P0CX71 YLL067CYLL067C 3618 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 NOC4YPR144C 1659 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 PGK1YCR012W 1251 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 YER165C-AYER165C-A 357 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 YFL051CYFL051C 483 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 CIC1YHR052W 1131 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 YAL026C-AYAL026C-A 438 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 RHO4YKR055W 876 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 GSY2YLR258W 2118 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 YMR010WYMR010W 1218 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 TRM10YOL093W 882 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 NIP7YPL211W 546 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 COQ1YBR003W 1422 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 STP4YDL048C 1473 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 SET5YHR207C 1581 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 CTK1YKL139W 1587 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 YDR131CYDR131C 1671 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 HIS7YBR248C 1659 nt5.37□□□□□ -1.55
TY1A-ER1P0CX71 DSE1YER124C 1722 nt5.37□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms