Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 C11orf96-202ENST00000528572 1834 ntBASIC19.84■□□□□ 0.77
HLA-DPB1P04440 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DPB1P04440 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DPB1P04440 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DPB1P04440 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.83■□□□□ 0.77
HLA-DPB1P04440 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.83■□□□□ 0.77
HLA-DPB1P04440 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HLA-DPB1P04440 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DPB1P04440 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DPB1P04440 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DPB1P04440 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DPB1P04440 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 AL031848.2-201ENST00000607670 837 ntBASIC19.82■□□□□ 0.76
HLA-DPB1P04440 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HLA-DPB1P04440 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPB1P04440 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DPB1P04440 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.81■□□□□ 0.76
HLA-DPB1P04440 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DPB1P04440 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPB1P04440 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPB1P04440 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPB1P04440 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DPB1P04440 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DPB1P04440 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 MIR4281-201ENST00000580852 62 ntBASIC19.8■□□□□ 0.76
HLA-DPB1P04440 AC139530.1-201ENST00000575312 1977 ntBASIC19.8■□□□□ 0.76
HLA-DPB1P04440 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DPB1P04440 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DPB1P04440 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPB1P04440 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPB1P04440 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.78■□□□□ 0.76
HLA-DPB1P04440 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPB1P04440 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPB1P04440 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPB1P04440 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPB1P04440 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPB1P04440 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPB1P04440 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPB1P04440 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DPB1P04440 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.78■□□□□ 0.76
HLA-DPB1P04440 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPB1P04440 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPB1P04440 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.77■□□□□ 0.76
HLA-DPB1P04440 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.77■□□□□ 0.76
HLA-DPB1P04440 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPB1P04440 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms