Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SOD1P00441 AC004687.1-201ENST00000579003 1625 ntBASIC21.95■■□□□ 1.1
SOD1P00441 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
SOD1P00441 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SOD1P00441 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SOD1P00441 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SOD1P00441 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SOD1P00441 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SOD1P00441 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SOD1P00441 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.94■■□□□ 1.1
SOD1P00441 DUSP8P3-201ENST00000399571 1760 ntBASIC21.94■■□□□ 1.1
SOD1P00441 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SOD1P00441 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SOD1P00441 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SOD1P00441 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
SOD1P00441 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SOD1P00441 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.94■■□□□ 1.1
SOD1P00441 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SOD1P00441 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.93■■□□□ 1.1
SOD1P00441 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SOD1P00441 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
SOD1P00441 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.93■■□□□ 1.1
SOD1P00441 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.93■■□□□ 1.1
SOD1P00441 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.93■■□□□ 1.1
SOD1P00441 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.93■■□□□ 1.1
SOD1P00441 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.93■■□□□ 1.1
SOD1P00441 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.93■■□□□ 1.1
SOD1P00441 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.93■■□□□ 1.1
SOD1P00441 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SOD1P00441 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.93■■□□□ 1.1
SOD1P00441 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SOD1P00441 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOD1P00441 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SOD1P00441 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOD1P00441 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.92■■□□□ 1.1
SOD1P00441 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOD1P00441 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOD1P00441 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.92■■□□□ 1.1
SOD1P00441 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SOD1P00441 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SOD1P00441 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOD1P00441 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SOD1P00441 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOD1P00441 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOD1P00441 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SOD1P00441 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.92■■□□□ 1.1
SOD1P00441 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.92■■□□□ 1.1
SOD1P00441 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.92■■□□□ 1.1
SOD1P00441 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SOD1P00441 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SOD1P00441 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SOD1P00441 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SOD1P00441 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SOD1P00441 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.91■■□□□ 1.1
SOD1P00441 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SOD1P00441 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SOD1P00441 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SOD1P00441 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
SOD1P00441 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SOD1P00441 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SOD1P00441 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SOD1P00441 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SOD1P00441 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.9■■□□□ 1.1
SOD1P00441 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SOD1P00441 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SOD1P00441 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.9■■□□□ 1.1
SOD1P00441 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SOD1P00441 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SOD1P00441 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SOD1P00441 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SOD1P00441 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.89■■□□□ 1.1
SOD1P00441 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SOD1P00441 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SOD1P00441 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.89■■□□□ 1.09
SOD1P00441 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SOD1P00441 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SOD1P00441 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SOD1P00441 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SOD1P00441 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.88■■□□□ 1.09
SOD1P00441 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SOD1P00441 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SOD1P00441 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SOD1P00441 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SOD1P00441 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
SOD1P00441 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SOD1P00441 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SOD1P00441 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SOD1P00441 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SOD1P00441 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.87■■□□□ 1.09
SOD1P00441 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SOD1P00441 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.87■■□□□ 1.09
SOD1P00441 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.87■■□□□ 1.09
SOD1P00441 AC126544.1-201ENST00000580842 1059 ntBASIC21.87■■□□□ 1.09
SOD1P00441 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SOD1P00441 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.87■■□□□ 1.09
SOD1P00441 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SOD1P00441 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.87■■□□□ 1.09
SOD1P00441 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SOD1P00441 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SOD1P00441 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms