Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN1O95832 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN1O95832 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CLDN1O95832 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN1O95832 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CLDN1O95832 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN1O95832 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN1O95832 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN1O95832 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN1O95832 AL022069.1-201ENST00000568025 1636 ntBASIC19.74■□□□□ 0.75
CLDN1O95832 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.74■□□□□ 0.75
CLDN1O95832 BID-214ENST00000617586 542 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDN1O95832 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN1O95832 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN1O95832 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CLDN1O95832 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN1O95832 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN1O95832 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN1O95832 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN1O95832 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN1O95832 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN1O95832 AL499627.2-201ENST00000606283 725 ntBASIC19.73■□□□□ 0.75
CLDN1O95832 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLDN1O95832 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN1O95832 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN1O95832 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.73■□□□□ 0.75
CLDN1O95832 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN1O95832 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN1O95832 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLDN1O95832 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN1O95832 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CLDN1O95832 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN1O95832 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.72■□□□□ 0.75
CLDN1O95832 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN1O95832 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.72■□□□□ 0.75
CLDN1O95832 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN1O95832 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLDN1O95832 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN1O95832 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN1O95832 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN1O95832 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.71■□□□□ 0.75
CLDN1O95832 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CLDN1O95832 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN1O95832 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLDN1O95832 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CLDN1O95832 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN1O95832 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CLDN1O95832 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN1O95832 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLDN1O95832 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN1O95832 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CLDN1O95832 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN1O95832 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN1O95832 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLDN1O95832 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CLDN1O95832 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN1O95832 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN1O95832 AC142381.3-201ENST00000568208 1670 ntBASIC19.7■□□□□ 0.74
CLDN1O95832 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN1O95832 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN1O95832 AC141586.4-201ENST00000624558 1573 ntBASIC19.7■□□□□ 0.74
CLDN1O95832 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN1O95832 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN1O95832 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLDN1O95832 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN1O95832 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN1O95832 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN1O95832 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN1O95832 AC010525.1-201ENST00000585559 441 ntBASIC19.69■□□□□ 0.74
CLDN1O95832 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN1O95832 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN1O95832 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN1O95832 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN1O95832 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN1O95832 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CLDN1O95832 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN1O95832 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN1O95832 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLDN1O95832 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.68■□□□□ 0.74
CLDN1O95832 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.68■□□□□ 0.74
CLDN1O95832 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN1O95832 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.68■□□□□ 0.74
CLDN1O95832 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN1O95832 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN1O95832 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN1O95832 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN1O95832 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN1O95832 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN1O95832 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN1O95832 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLDN1O95832 MIR663A-201ENST00000385250 93 ntBASIC19.67■□□□□ 0.74
CLDN1O95832 GPX1P1-201ENST00000388829 606 ntBASIC19.67■□□□□ 0.74
CLDN1O95832 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLDN1O95832 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN1O95832 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN1O95832 AC105233.4-201ENST00000642045 216 ntBASIC19.67■□□□□ 0.74
CLDN1O95832 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLDN1O95832 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN1O95832 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN1O95832 AC133637.1-201ENST00000624115 1537 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms