Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
BEST1O76090 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
BEST1O76090 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.38■■□□□ 1.33
BEST1O76090 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
BEST1O76090 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
BEST1O76090 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.38■■□□□ 1.33
BEST1O76090 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
BEST1O76090 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
BEST1O76090 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.38■■□□□ 1.33
BEST1O76090 BX842568.3-201ENST00000418104 571 ntBASIC23.38■■□□□ 1.33
BEST1O76090 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.38■■□□□ 1.33
BEST1O76090 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
BEST1O76090 AC233992.3-201ENST00000607491 485 ntBASIC23.38■■□□□ 1.33
BEST1O76090 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.38■■□□□ 1.33
BEST1O76090 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
BEST1O76090 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
BEST1O76090 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.38■■□□□ 1.33
BEST1O76090 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
BEST1O76090 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
BEST1O76090 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BEST1O76090 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BEST1O76090 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BEST1O76090 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.37■■□□□ 1.33
BEST1O76090 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
BEST1O76090 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.37■■□□□ 1.33
BEST1O76090 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
BEST1O76090 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BEST1O76090 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
BEST1O76090 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
BEST1O76090 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.36■■□□□ 1.33
BEST1O76090 AC091305.1-201ENST00000479476 895 ntBASIC23.36■■□□□ 1.33
BEST1O76090 AC027682.1-201ENST00000562846 899 ntBASIC23.36■■□□□ 1.33
BEST1O76090 CA15P2-201ENST00000611168 834 ntBASIC23.36■■□□□ 1.33
BEST1O76090 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.36■■□□□ 1.33
BEST1O76090 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.36■■□□□ 1.33
BEST1O76090 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
BEST1O76090 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BEST1O76090 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
BEST1O76090 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
BEST1O76090 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.35■■□□□ 1.33
BEST1O76090 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BEST1O76090 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
BEST1O76090 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BEST1O76090 ZNRF2P3-201ENST00000424200 374 ntBASIC23.35■■□□□ 1.33
BEST1O76090 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
BEST1O76090 OR2I1P-207ENST00000453522 948 ntBASIC23.35■■□□□ 1.33
BEST1O76090 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.35■■□□□ 1.33
BEST1O76090 RASA4CP-201ENST00000424092 1398 ntBASIC23.35■■□□□ 1.33
BEST1O76090 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
BEST1O76090 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.34■■□□□ 1.33
BEST1O76090 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BEST1O76090 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BEST1O76090 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
BEST1O76090 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BEST1O76090 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
BEST1O76090 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
BEST1O76090 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.34■■□□□ 1.33
BEST1O76090 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
BEST1O76090 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
BEST1O76090 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
BEST1O76090 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
BEST1O76090 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
BEST1O76090 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.33■■□□□ 1.33
BEST1O76090 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
BEST1O76090 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
BEST1O76090 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.33■■□□□ 1.33
BEST1O76090 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
BEST1O76090 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
BEST1O76090 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
BEST1O76090 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BEST1O76090 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.32■■□□□ 1.32
BEST1O76090 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
BEST1O76090 AC105265.2-201ENST00000467189 838 ntBASIC23.32■■□□□ 1.32
BEST1O76090 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.32■■□□□ 1.32
BEST1O76090 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.32■■□□□ 1.32
BEST1O76090 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BEST1O76090 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BEST1O76090 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.32■■□□□ 1.32
BEST1O76090 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BEST1O76090 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.31■■□□□ 1.32
BEST1O76090 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.31■■□□□ 1.32
BEST1O76090 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.31■■□□□ 1.32
BEST1O76090 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
BEST1O76090 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
BEST1O76090 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
BEST1O76090 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
BEST1O76090 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
BEST1O76090 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
BEST1O76090 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
BEST1O76090 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
BEST1O76090 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.3■■□□□ 1.32
BEST1O76090 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
BEST1O76090 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BEST1O76090 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BEST1O76090 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
BEST1O76090 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.29■■□□□ 1.32
BEST1O76090 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
BEST1O76090 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
BEST1O76090 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BEST1O76090 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms