Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLPXO76031 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.03■□□□□ 0.8
CLPXO76031 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.03■□□□□ 0.8
CLPXO76031 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLPXO76031 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPXO76031 MIR3960-201ENST00000583311 91 ntBASIC20.03■□□□□ 0.8
CLPXO76031 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPXO76031 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.03■□□□□ 0.8
CLPXO76031 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPXO76031 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
CLPXO76031 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPXO76031 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
CLPXO76031 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CLPXO76031 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPXO76031 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPXO76031 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLPXO76031 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CLPXO76031 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.02■□□□□ 0.8
CLPXO76031 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLPXO76031 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLPXO76031 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLPXO76031 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLPXO76031 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLPXO76031 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CLPXO76031 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.01■□□□□ 0.79
CLPXO76031 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.01■□□□□ 0.79
CLPXO76031 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPXO76031 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPXO76031 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.01■□□□□ 0.79
CLPXO76031 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPXO76031 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.01■□□□□ 0.79
CLPXO76031 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.01■□□□□ 0.79
CLPXO76031 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.01■□□□□ 0.79
CLPXO76031 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.01■□□□□ 0.79
CLPXO76031 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPXO76031 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPXO76031 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPXO76031 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLPXO76031 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CLPXO76031 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLPXO76031 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLPXO76031 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLPXO76031 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLPXO76031 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLPXO76031 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CLPXO76031 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLPXO76031 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20■□□□□ 0.79
CLPXO76031 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20■□□□□ 0.79
CLPXO76031 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CLPXO76031 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CLPXO76031 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20■□□□□ 0.79
CLPXO76031 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CLPXO76031 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20■□□□□ 0.79
CLPXO76031 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLPXO76031 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20■□□□□ 0.79
CLPXO76031 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLPXO76031 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLPXO76031 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLPXO76031 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.99■□□□□ 0.79
CLPXO76031 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.99■□□□□ 0.79
CLPXO76031 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.99■□□□□ 0.79
CLPXO76031 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.99■□□□□ 0.79
CLPXO76031 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLPXO76031 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLPXO76031 FAM99A-202ENST00000538190 1989 ntBASIC19.99■□□□□ 0.79
CLPXO76031 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLPXO76031 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLPXO76031 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CLPXO76031 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLPXO76031 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLPXO76031 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLPXO76031 AC007029.1-201ENST00000604183 313 ntBASIC19.98■□□□□ 0.79
CLPXO76031 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLPXO76031 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLPXO76031 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLPXO76031 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CLPXO76031 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLPXO76031 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLPXO76031 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPXO76031 AC080038.3-201ENST00000623346 1952 ntBASIC19.97■□□□□ 0.79
CLPXO76031 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPXO76031 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.97■□□□□ 0.79
CLPXO76031 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CLPXO76031 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPXO76031 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPXO76031 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPXO76031 AC007952.6-201ENST00000573168 2673 ntBASIC19.97■□□□□ 0.79
CLPXO76031 AC003957.1-201ENST00000625108 2673 ntBASIC19.97■□□□□ 0.79
CLPXO76031 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLPXO76031 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.97■□□□□ 0.79
CLPXO76031 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLPXO76031 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CLPXO76031 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLPXO76031 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLPXO76031 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.96■□□□□ 0.79
CLPXO76031 RP9P-202ENST00000450133 1212 ntBASIC19.96■□□□□ 0.79
CLPXO76031 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CLPXO76031 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLPXO76031 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLPXO76031 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms