Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SUPT3HO75486 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SUPT3HO75486 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SUPT3HO75486 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.83■■□□□ 1.09
SUPT3HO75486 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SUPT3HO75486 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.83■■□□□ 1.09
SUPT3HO75486 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SUPT3HO75486 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.83■■□□□ 1.09
SUPT3HO75486 MTDHP2-201ENST00000601468 714 ntBASIC21.83■■□□□ 1.09
SUPT3HO75486 MIR4787-201ENST00000607364 84 ntBASIC21.83■■□□□ 1.09
SUPT3HO75486 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SUPT3HO75486 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.83■■□□□ 1.08
SUPT3HO75486 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.83■■□□□ 1.08
SUPT3HO75486 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.83■■□□□ 1.08
SUPT3HO75486 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SUPT3HO75486 EP400NL-214ENST00000641289 2402 ntBASIC21.82■■□□□ 1.08
SUPT3HO75486 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SUPT3HO75486 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.82■■□□□ 1.08
SUPT3HO75486 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SUPT3HO75486 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.82■■□□□ 1.08
SUPT3HO75486 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SUPT3HO75486 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SUPT3HO75486 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SUPT3HO75486 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
SUPT3HO75486 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.81■■□□□ 1.08
SUPT3HO75486 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SUPT3HO75486 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SUPT3HO75486 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.81■■□□□ 1.08
SUPT3HO75486 AC239859.2-201ENST00000444165 318 ntBASIC21.81■■□□□ 1.08
SUPT3HO75486 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SUPT3HO75486 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SUPT3HO75486 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SUPT3HO75486 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.8■■□□□ 1.08
SUPT3HO75486 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SUPT3HO75486 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SUPT3HO75486 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SUPT3HO75486 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.8■■□□□ 1.08
SUPT3HO75486 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.8■■□□□ 1.08
SUPT3HO75486 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SUPT3HO75486 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SUPT3HO75486 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SUPT3HO75486 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SUPT3HO75486 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SUPT3HO75486 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SUPT3HO75486 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SUPT3HO75486 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.8■■□□□ 1.08
SUPT3HO75486 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.79■■□□□ 1.08
SUPT3HO75486 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SUPT3HO75486 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SUPT3HO75486 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.79■■□□□ 1.08
SUPT3HO75486 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SUPT3HO75486 TSPY9P-201ENST00000440215 945 ntBASIC21.79■■□□□ 1.08
SUPT3HO75486 TSPY11P-201ENST00000442607 1045 ntBASIC21.79■■□□□ 1.08
SUPT3HO75486 AC009299.2-201ENST00000482477 511 ntBASIC21.79■■□□□ 1.08
SUPT3HO75486 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.79■■□□□ 1.08
SUPT3HO75486 ESRRAP2-201ENST00000418437 1549 ntBASIC21.79■■□□□ 1.08
SUPT3HO75486 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SUPT3HO75486 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SUPT3HO75486 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.78■■□□□ 1.08
SUPT3HO75486 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.78■■□□□ 1.08
SUPT3HO75486 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.78■■□□□ 1.08
SUPT3HO75486 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.78■■□□□ 1.08
SUPT3HO75486 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
SUPT3HO75486 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SUPT3HO75486 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.78■■□□□ 1.08
SUPT3HO75486 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SUPT3HO75486 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SUPT3HO75486 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SUPT3HO75486 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SUPT3HO75486 LINC01529-204ENST00000636474 1715 ntBASIC21.77■■□□□ 1.08
SUPT3HO75486 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SUPT3HO75486 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SUPT3HO75486 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SUPT3HO75486 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SUPT3HO75486 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SUPT3HO75486 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SUPT3HO75486 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SUPT3HO75486 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SUPT3HO75486 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SUPT3HO75486 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.77■■□□□ 1.08
SUPT3HO75486 AL451085.2-201ENST00000605085 799 ntBASIC21.77■■□□□ 1.08
SUPT3HO75486 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SUPT3HO75486 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SUPT3HO75486 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SUPT3HO75486 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
SUPT3HO75486 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.77■■□□□ 1.07
SUPT3HO75486 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.77■■□□□ 1.07
SUPT3HO75486 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms