Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.16■□□□□ 0.98
CPNE3O75131 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE3O75131 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE3O75131 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE3O75131 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE3O75131 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.15■□□□□ 0.98
CPNE3O75131 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE3O75131 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE3O75131 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.15■□□□□ 0.98
CPNE3O75131 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.15■□□□□ 0.98
CPNE3O75131 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE3O75131 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE3O75131 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CPNE3O75131 AC079834.2-201ENST00000609776 1949 ntBASIC21.15■□□□□ 0.98
CPNE3O75131 LINC01529-204ENST00000636474 1715 ntBASIC21.15■□□□□ 0.98
CPNE3O75131 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE3O75131 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE3O75131 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE3O75131 TSPY26P-201ENST00000476365 1326 ntBASIC21.14■□□□□ 0.97
CPNE3O75131 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CPNE3O75131 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.14■□□□□ 0.97
CPNE3O75131 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE3O75131 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE3O75131 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CPNE3O75131 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE3O75131 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE3O75131 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.13■□□□□ 0.97
CPNE3O75131 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CPNE3O75131 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE3O75131 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CPNE3O75131 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE3O75131 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE3O75131 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE3O75131 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE3O75131 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CPNE3O75131 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.13■□□□□ 0.97
CPNE3O75131 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE3O75131 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.13■□□□□ 0.97
CPNE3O75131 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE3O75131 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.13■□□□□ 0.97
CPNE3O75131 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.13■□□□□ 0.97
CPNE3O75131 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE3O75131 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE3O75131 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE3O75131 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CPNE3O75131 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.12■□□□□ 0.97
CPNE3O75131 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE3O75131 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CPNE3O75131 LINC01124-201ENST00000409786 2117 ntBASIC21.12■□□□□ 0.97
CPNE3O75131 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CPNE3O75131 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE3O75131 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.12■□□□□ 0.97
CPNE3O75131 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE3O75131 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE3O75131 AC104564.3-201ENST00000582367 638 ntBASIC21.12■□□□□ 0.97
CPNE3O75131 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE3O75131 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE3O75131 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE3O75131 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CPNE3O75131 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.11■□□□□ 0.97
CPNE3O75131 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CPNE3O75131 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.11■□□□□ 0.97
CPNE3O75131 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 OR2I1P-207ENST00000453522 948 ntBASIC21.11■□□□□ 0.97
CPNE3O75131 IGHV3-19-201ENST00000521488 291 ntBASIC21.11■□□□□ 0.97
CPNE3O75131 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.11■□□□□ 0.97
CPNE3O75131 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 AC092666.2-201ENST00000613287 246 ntBASIC21.11■□□□□ 0.97
CPNE3O75131 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.11■□□□□ 0.97
CPNE3O75131 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.11■□□□□ 0.97
CPNE3O75131 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE3O75131 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.1■□□□□ 0.97
CPNE3O75131 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE3O75131 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.1■□□□□ 0.97
CPNE3O75131 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CPNE3O75131 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CPNE3O75131 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE3O75131 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
CPNE3O75131 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE3O75131 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE3O75131 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.1■□□□□ 0.97
CPNE3O75131 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.1■□□□□ 0.97
CPNE3O75131 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CPNE3O75131 AC087623.3-201ENST00000607047 1098 ntBASIC21.1■□□□□ 0.97
CPNE3O75131 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE3O75131 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CPNE3O75131 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
CPNE3O75131 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE3O75131 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CPNE3O75131 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms