Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX3O60493 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX3O60493 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX3O60493 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.86■■□□□ 1.09
SNX3O60493 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.86■■□□□ 1.09
SNX3O60493 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
SNX3O60493 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SNX3O60493 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SNX3O60493 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SNX3O60493 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
SNX3O60493 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX3O60493 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.85■■□□□ 1.09
SNX3O60493 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX3O60493 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SNX3O60493 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.85■■□□□ 1.09
SNX3O60493 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNX3O60493 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX3O60493 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNX3O60493 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNX3O60493 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.85■■□□□ 1.09
SNX3O60493 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.84■■□□□ 1.09
SNX3O60493 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.84■■□□□ 1.09
SNX3O60493 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX3O60493 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.84■■□□□ 1.09
SNX3O60493 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX3O60493 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX3O60493 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNX3O60493 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX3O60493 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX3O60493 ZNRF2P2-203ENST00000454624 420 ntBASIC21.84■■□□□ 1.09
SNX3O60493 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SNX3O60493 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.84■■□□□ 1.09
SNX3O60493 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SNX3O60493 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNX3O60493 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNX3O60493 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNX3O60493 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.83■■□□□ 1.09
SNX3O60493 AC007029.1-201ENST00000604183 313 ntBASIC21.83■■□□□ 1.09
SNX3O60493 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SNX3O60493 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
SNX3O60493 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SNX3O60493 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNX3O60493 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNX3O60493 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNX3O60493 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX3O60493 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.82■■□□□ 1.08
SNX3O60493 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.82■■□□□ 1.08
SNX3O60493 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.82■■□□□ 1.08
SNX3O60493 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
SNX3O60493 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SNX3O60493 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNX3O60493 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX3O60493 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
SNX3O60493 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX3O60493 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNX3O60493 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.81■■□□□ 1.08
SNX3O60493 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNX3O60493 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.81■■□□□ 1.08
SNX3O60493 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX3O60493 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX3O60493 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNX3O60493 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.8■■□□□ 1.08
SNX3O60493 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.8■■□□□ 1.08
SNX3O60493 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX3O60493 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.8■■□□□ 1.08
SNX3O60493 AL157384.1-201ENST00000445995 2473 ntBASIC21.8■■□□□ 1.08
SNX3O60493 AL592295.1-201ENST00000400984 884 ntBASIC21.8■■□□□ 1.08
SNX3O60493 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SNX3O60493 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SNX3O60493 MIR3648-2-201ENST00000581792 180 ntBASIC21.8■■□□□ 1.08
SNX3O60493 MIR3648-1-201ENST00000615959 180 ntBASIC21.8■■□□□ 1.08
SNX3O60493 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX3O60493 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX3O60493 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX3O60493 AC244015.2-201ENST00000616358 1861 ntBASIC21.79■■□□□ 1.08
SNX3O60493 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
SNX3O60493 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX3O60493 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
SNX3O60493 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX3O60493 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.79■■□□□ 1.08
SNX3O60493 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SNX3O60493 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.79■■□□□ 1.08
SNX3O60493 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX3O60493 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.78■■□□□ 1.08
SNX3O60493 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX3O60493 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SNX3O60493 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX3O60493 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX3O60493 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX3O60493 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SNX3O60493 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX3O60493 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX3O60493 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX3O60493 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX3O60493 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX3O60493 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
SNX3O60493 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX3O60493 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX3O60493 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX3O60493 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms