Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNAI2O43623 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNAI2O43623 SPCS2P3-201ENST00000500401 656 ntBASIC16.46■□□□□ 0.23
SNAI2O43623 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNAI2O43623 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
SNAI2O43623 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNAI2O43623 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNAI2O43623 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.46■□□□□ 0.23
SNAI2O43623 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNAI2O43623 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNAI2O43623 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.46■□□□□ 0.23
SNAI2O43623 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNAI2O43623 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNAI2O43623 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNAI2O43623 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNAI2O43623 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNAI2O43623 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNAI2O43623 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SNAI2O43623 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNAI2O43623 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNAI2O43623 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNAI2O43623 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNAI2O43623 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNAI2O43623 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNAI2O43623 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNAI2O43623 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNAI2O43623 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNAI2O43623 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNAI2O43623 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNAI2O43623 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNAI2O43623 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.44■□□□□ 0.22
SNAI2O43623 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNAI2O43623 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SNAI2O43623 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.44■□□□□ 0.22
SNAI2O43623 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNAI2O43623 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.44■□□□□ 0.22
SNAI2O43623 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNAI2O43623 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.43■□□□□ 0.22
SNAI2O43623 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.43■□□□□ 0.22
SNAI2O43623 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNAI2O43623 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
SNAI2O43623 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SNAI2O43623 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNAI2O43623 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.43■□□□□ 0.22
SNAI2O43623 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNAI2O43623 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNAI2O43623 AL592293.1-201ENST00000502889 1188 ntBASIC16.43■□□□□ 0.22
SNAI2O43623 MIR6765-201ENST00000614092 87 ntBASIC16.43■□□□□ 0.22
SNAI2O43623 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.43■□□□□ 0.22
SNAI2O43623 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNAI2O43623 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SNAI2O43623 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.43■□□□□ 0.22
SNAI2O43623 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.43■□□□□ 0.22
SNAI2O43623 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNAI2O43623 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
SNAI2O43623 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SNAI2O43623 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SNAI2O43623 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SNAI2O43623 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SNAI2O43623 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.42■□□□□ 0.22
SNAI2O43623 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 LONRF2P2-201ENST00000439212 571 ntBASIC16.42■□□□□ 0.22
SNAI2O43623 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SNAI2O43623 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.42■□□□□ 0.22
SNAI2O43623 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SNAI2O43623 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.42■□□□□ 0.22
SNAI2O43623 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SNAI2O43623 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNAI2O43623 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNAI2O43623 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNAI2O43623 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNAI2O43623 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNAI2O43623 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNAI2O43623 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNAI2O43623 AC079630.1-202ENST00000618127 1840 ntBASIC16.41■□□□□ 0.22
SNAI2O43623 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SNAI2O43623 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNAI2O43623 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.41■□□□□ 0.22
SNAI2O43623 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNAI2O43623 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNAI2O43623 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SNAI2O43623 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNAI2O43623 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNAI2O43623 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNAI2O43623 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SNAI2O43623 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNAI2O43623 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNAI2O43623 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNAI2O43623 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms