Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AC233723.2-201ENST00000623798 2106 ntBASIC19.18■□□□□ 0.66
XRCC2O43543 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.18■□□□□ 0.66
XRCC2O43543 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
XRCC2O43543 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 AL356740.2-201ENST00000601559 647 ntBASIC19.18■□□□□ 0.66
XRCC2O43543 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.18■□□□□ 0.66
XRCC2O43543 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC2O43543 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.18■□□□□ 0.66
XRCC2O43543 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
XRCC2O43543 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.18■□□□□ 0.66
XRCC2O43543 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.17■□□□□ 0.66
XRCC2O43543 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC2O43543 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
XRCC2O43543 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC2O43543 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
XRCC2O43543 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC2O43543 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.17■□□□□ 0.66
XRCC2O43543 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.17■□□□□ 0.66
XRCC2O43543 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.17■□□□□ 0.66
XRCC2O43543 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.17■□□□□ 0.66
XRCC2O43543 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC2O43543 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
XRCC2O43543 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC2O43543 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
XRCC2O43543 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC2O43543 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC2O43543 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.17■□□□□ 0.66
XRCC2O43543 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
XRCC2O43543 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.16■□□□□ 0.66
XRCC2O43543 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
XRCC2O43543 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.16■□□□□ 0.66
XRCC2O43543 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.16■□□□□ 0.66
XRCC2O43543 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.16■□□□□ 0.66
XRCC2O43543 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
XRCC2O43543 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
XRCC2O43543 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
XRCC2O43543 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC2O43543 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC2O43543 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.15■□□□□ 0.66
XRCC2O43543 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
XRCC2O43543 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.15■□□□□ 0.66
XRCC2O43543 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.15■□□□□ 0.66
XRCC2O43543 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC2O43543 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC2O43543 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC2O43543 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC2O43543 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.15■□□□□ 0.66
XRCC2O43543 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
XRCC2O43543 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
XRCC2O43543 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.14■□□□□ 0.66
XRCC2O43543 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC2O43543 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC2O43543 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC2O43543 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
XRCC2O43543 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.14■□□□□ 0.65
XRCC2O43543 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC2O43543 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC2O43543 AC241377.3-202ENST00000626088 1088 ntBASIC19.14■□□□□ 0.65
XRCC2O43543 AC241585.3-202ENST00000628937 1088 ntBASIC19.14■□□□□ 0.65
XRCC2O43543 AC245100.8-202ENST00000629247 1058 ntBASIC19.14■□□□□ 0.65
XRCC2O43543 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC2O43543 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
XRCC2O43543 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
XRCC2O43543 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
XRCC2O43543 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
XRCC2O43543 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
XRCC2O43543 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
XRCC2O43543 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
XRCC2O43543 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
XRCC2O43543 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.13■□□□□ 0.65
XRCC2O43543 MIR3621-201ENST00000580529 85 ntBASIC19.13■□□□□ 0.65
XRCC2O43543 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
XRCC2O43543 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
XRCC2O43543 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
XRCC2O43543 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
XRCC2O43543 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
XRCC2O43543 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
XRCC2O43543 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
XRCC2O43543 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
XRCC2O43543 AL117328.2-201ENST00000624617 1940 ntBASIC19.13■□□□□ 0.65
XRCC2O43543 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms