Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPM1DO15297 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPM1DO15297 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PPM1DO15297 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPM1DO15297 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.6■■□□□ 1.05
PPM1DO15297 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.6■■□□□ 1.05
PPM1DO15297 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PPM1DO15297 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.6■■□□□ 1.05
PPM1DO15297 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPM1DO15297 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.6■■□□□ 1.05
PPM1DO15297 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPM1DO15297 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PPM1DO15297 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PPM1DO15297 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPM1DO15297 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.59■■□□□ 1.05
PPM1DO15297 AC087623.3-201ENST00000607047 1098 ntBASIC21.59■■□□□ 1.05
PPM1DO15297 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPM1DO15297 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPM1DO15297 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.58■■□□□ 1.05
PPM1DO15297 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PPM1DO15297 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.58■■□□□ 1.05
PPM1DO15297 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.58■■□□□ 1.05
PPM1DO15297 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPM1DO15297 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.05
PPM1DO15297 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPM1DO15297 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPM1DO15297 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PPM1DO15297 AC079630.1-202ENST00000618127 1840 ntBASIC21.57■■□□□ 1.04
PPM1DO15297 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPM1DO15297 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPM1DO15297 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.57■■□□□ 1.04
PPM1DO15297 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPM1DO15297 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PPM1DO15297 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPM1DO15297 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPM1DO15297 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPM1DO15297 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPM1DO15297 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PPM1DO15297 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPM1DO15297 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.57■■□□□ 1.04
PPM1DO15297 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.57■■□□□ 1.04
PPM1DO15297 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PPM1DO15297 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
PPM1DO15297 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PPM1DO15297 OR2I1P-207ENST00000453522 948 ntBASIC21.56■■□□□ 1.04
PPM1DO15297 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.56■■□□□ 1.04
PPM1DO15297 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.56■■□□□ 1.04
PPM1DO15297 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.56■■□□□ 1.04
PPM1DO15297 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PPM1DO15297 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PPM1DO15297 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPM1DO15297 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PPM1DO15297 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPM1DO15297 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPM1DO15297 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PPM1DO15297 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPM1DO15297 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PPM1DO15297 IGHV3-19-201ENST00000521488 291 ntBASIC21.55■■□□□ 1.04
PPM1DO15297 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PPM1DO15297 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.55■■□□□ 1.04
PPM1DO15297 AC092666.2-201ENST00000613287 246 ntBASIC21.55■■□□□ 1.04
PPM1DO15297 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.55■■□□□ 1.04
PPM1DO15297 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.55■■□□□ 1.04
PPM1DO15297 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PPM1DO15297 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPM1DO15297 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.55■■□□□ 1.04
PPM1DO15297 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.55■■□□□ 1.04
PPM1DO15297 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPM1DO15297 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPM1DO15297 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
PPM1DO15297 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.55■■□□□ 1.04
PPM1DO15297 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.55■■□□□ 1.04
PPM1DO15297 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPM1DO15297 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.54■■□□□ 1.04
PPM1DO15297 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PPM1DO15297 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPM1DO15297 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.54■■□□□ 1.04
PPM1DO15297 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PPM1DO15297 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.54■■□□□ 1.04
PPM1DO15297 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.54■■□□□ 1.04
PPM1DO15297 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPM1DO15297 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.54■■□□□ 1.04
PPM1DO15297 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPM1DO15297 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PPM1DO15297 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPM1DO15297 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.53■■□□□ 1.04
PPM1DO15297 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.53■■□□□ 1.04
PPM1DO15297 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPM1DO15297 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.53■■□□□ 1.04
PPM1DO15297 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPM1DO15297 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPM1DO15297 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PPM1DO15297 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.53■■□□□ 1.04
PPM1DO15297 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPM1DO15297 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.52■■□□□ 1.04
PPM1DO15297 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPM1DO15297 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.52■■□□□ 1.04
PPM1DO15297 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.52■■□□□ 1.04
PPM1DO15297 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
PPM1DO15297 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms