Protein–RNA interactions for Protein: O15232

MATN3, Matrilin-3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3O15232 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
MATN3O15232 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MATN3O15232 AL136116.3-201ENST00000402907 1138 ntBASIC22.58■■□□□ 1.21
MATN3O15232 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
MATN3O15232 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
MATN3O15232 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MATN3O15232 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MATN3O15232 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MATN3O15232 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MATN3O15232 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MATN3O15232 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.57■■□□□ 1.2
MATN3O15232 MIR3181-201ENST00000578512 73 ntBASIC22.57■■□□□ 1.2
MATN3O15232 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MATN3O15232 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.57■■□□□ 1.2
MATN3O15232 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
MATN3O15232 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.57■■□□□ 1.2
MATN3O15232 AC004687.1-201ENST00000579003 1625 ntBASIC22.57■■□□□ 1.2
MATN3O15232 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MATN3O15232 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.57■■□□□ 1.2
MATN3O15232 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.56■■□□□ 1.2
MATN3O15232 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MATN3O15232 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.56■■□□□ 1.2
MATN3O15232 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.56■■□□□ 1.2
MATN3O15232 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
MATN3O15232 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
MATN3O15232 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MATN3O15232 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
MATN3O15232 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
MATN3O15232 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MATN3O15232 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MATN3O15232 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
MATN3O15232 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.55■■□□□ 1.2
MATN3O15232 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MATN3O15232 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.55■■□□□ 1.2
MATN3O15232 DUX4L19-201ENST00000557448 1267 ntBASIC22.55■■□□□ 1.2
MATN3O15232 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.55■■□□□ 1.2
MATN3O15232 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MATN3O15232 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MATN3O15232 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MATN3O15232 AC133637.1-201ENST00000624115 1537 ntBASIC22.55■■□□□ 1.2
MATN3O15232 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MATN3O15232 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
MATN3O15232 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
MATN3O15232 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
MATN3O15232 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
MATN3O15232 AC008406.3-201ENST00000620001 1374 ntBASIC22.54■■□□□ 1.2
MATN3O15232 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.54■■□□□ 1.2
MATN3O15232 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
MATN3O15232 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
MATN3O15232 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.54■■□□□ 1.2
MATN3O15232 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
MATN3O15232 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
MATN3O15232 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
MATN3O15232 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
MATN3O15232 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MATN3O15232 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MATN3O15232 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
MATN3O15232 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
MATN3O15232 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
MATN3O15232 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.53■■□□□ 1.2
MATN3O15232 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
MATN3O15232 SYT6-210ENST00000641643 1587 ntBASIC22.53■■□□□ 1.2
MATN3O15232 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.53■■□□□ 1.2
MATN3O15232 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
MATN3O15232 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
MATN3O15232 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
MATN3O15232 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
MATN3O15232 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.52■■□□□ 1.2
MATN3O15232 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MATN3O15232 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MATN3O15232 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
MATN3O15232 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.52■■□□□ 1.2
MATN3O15232 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
MATN3O15232 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
MATN3O15232 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
MATN3O15232 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MATN3O15232 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
MATN3O15232 SERBP1P1-201ENST00000396021 1160 ntBASIC22.51■■□□□ 1.19
MATN3O15232 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.51■■□□□ 1.19
MATN3O15232 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
MATN3O15232 AL138724.1-201ENST00000606771 1088 ntBASIC22.51■■□□□ 1.19
MATN3O15232 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.51■■□□□ 1.19
MATN3O15232 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.51■■□□□ 1.19
MATN3O15232 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MATN3O15232 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
MATN3O15232 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
MATN3O15232 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
MATN3O15232 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.5■■□□□ 1.19
MATN3O15232 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.5■■□□□ 1.19
MATN3O15232 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.5■■□□□ 1.19
MATN3O15232 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MATN3O15232 ESRRAP2-201ENST00000418437 1549 ntBASIC22.5■■□□□ 1.19
MATN3O15232 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MATN3O15232 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.5■■□□□ 1.19
MATN3O15232 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
MATN3O15232 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
MATN3O15232 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MATN3O15232 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
MATN3O15232 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MATN3O15232 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms