Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
CUX2O14529 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
CUX2O14529 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC38.6■■■■□ 3.77
CUX2O14529 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC38.6■■■■□ 3.77
CUX2O14529 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC38.6■■■■□ 3.77
CUX2O14529 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
CUX2O14529 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
CUX2O14529 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC38.59■■■■□ 3.77
CUX2O14529 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC38.59■■■■□ 3.77
CUX2O14529 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC38.58■■■■□ 3.77
CUX2O14529 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
CUX2O14529 RARRES2P4-201ENST00000514074 484 ntBASIC38.58■■■■□ 3.77
CUX2O14529 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC38.58■■■■□ 3.77
CUX2O14529 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC38.58■■■■□ 3.77
CUX2O14529 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC38.58■■■■□ 3.77
CUX2O14529 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC38.58■■■■□ 3.77
CUX2O14529 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
CUX2O14529 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC38.57■■■■□ 3.77
CUX2O14529 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.77
CUX2O14529 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.76
CUX2O14529 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC38.57■■■■□ 3.76
CUX2O14529 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC38.57■■■■□ 3.76
CUX2O14529 ADM-205ENST00000528544 586 ntTSL 2 BASIC38.57■■■■□ 3.76
CUX2O14529 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC38.57■■■■□ 3.76
CUX2O14529 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC38.57■■■■□ 3.76
CUX2O14529 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC38.56■■■■□ 3.76
CUX2O14529 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC38.56■■■■□ 3.76
CUX2O14529 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC38.56■■■■□ 3.76
CUX2O14529 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC38.56■■■■□ 3.76
CUX2O14529 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC38.56■■■■□ 3.76
CUX2O14529 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC38.56■■■■□ 3.76
CUX2O14529 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
CUX2O14529 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
CUX2O14529 ECEL1P3-201ENST00000427961 737 ntBASIC38.55■■■■□ 3.76
CUX2O14529 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
CUX2O14529 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC38.54■■■■□ 3.76
CUX2O14529 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
CUX2O14529 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
CUX2O14529 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC38.54■■■■□ 3.76
CUX2O14529 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC38.54■■■■□ 3.76
CUX2O14529 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
CUX2O14529 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC38.53■■■■□ 3.76
CUX2O14529 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC38.53■■■■□ 3.76
CUX2O14529 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC38.53■■■■□ 3.76
CUX2O14529 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC38.53■■■■□ 3.76
CUX2O14529 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC38.53■■■■□ 3.76
CUX2O14529 AC092118.2-201ENST00000613495 667 ntBASIC38.53■■■■□ 3.76
CUX2O14529 PKM-203ENST00000389093 2279 ntTSL 5 BASIC38.52■■■■□ 3.76
CUX2O14529 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC38.52■■■■□ 3.76
CUX2O14529 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
CUX2O14529 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
CUX2O14529 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
CUX2O14529 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
CUX2O14529 AF201337.1-201ENST00000520239 748 ntBASIC38.52■■■■□ 3.76
CUX2O14529 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
CUX2O14529 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
CUX2O14529 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC38.51■■■■□ 3.76
CUX2O14529 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC38.51■■■■□ 3.76
CUX2O14529 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC38.51■■■■□ 3.76
CUX2O14529 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC38.51■■■■□ 3.76
CUX2O14529 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC38.51■■■■□ 3.76
CUX2O14529 TESC-206ENST00000541210 936 ntTSL 3 BASIC38.51■■■■□ 3.76
CUX2O14529 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC38.51■■■■□ 3.76
CUX2O14529 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC38.51■■■■□ 3.76
CUX2O14529 AC073912.3-201ENST00000624414 853 ntBASIC38.51■■■■□ 3.76
CUX2O14529 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC38.51■■■■□ 3.75
CUX2O14529 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC38.5■■■■□ 3.75
CUX2O14529 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
CUX2O14529 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC38.5■■■■□ 3.75
CUX2O14529 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC38.5■■■■□ 3.75
CUX2O14529 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC38.5■■■■□ 3.75
CUX2O14529 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
CUX2O14529 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC38.5■■■■□ 3.75
CUX2O14529 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC38.5■■■■□ 3.75
CUX2O14529 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC38.5■■■■□ 3.75
CUX2O14529 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC38.49■■■■□ 3.75
CUX2O14529 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
CUX2O14529 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
CUX2O14529 AL158047.1-201ENST00000445918 881 ntBASIC38.49■■■■□ 3.75
CUX2O14529 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC38.49■■■■□ 3.75
CUX2O14529 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC38.48■■■■□ 3.75
CUX2O14529 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC38.48■■■■□ 3.75
CUX2O14529 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC38.48■■■■□ 3.75
CUX2O14529 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC38.48■■■■□ 3.75
CUX2O14529 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC38.48■■■■□ 3.75
CUX2O14529 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC38.47■■■■□ 3.75
CUX2O14529 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC38.47■■■■□ 3.75
CUX2O14529 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC38.47■■■■□ 3.75
CUX2O14529 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC38.47■■■■□ 3.75
CUX2O14529 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC38.47■■■■□ 3.75
CUX2O14529 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
CUX2O14529 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC38.47■■■■□ 3.75
CUX2O14529 AC133552.2-202ENST00000575694 574 ntBASIC38.47■■■■□ 3.75
CUX2O14529 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
CUX2O14529 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC38.46■■■■□ 3.75
CUX2O14529 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC38.46■■■■□ 3.75
CUX2O14529 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC38.46■■■■□ 3.75
CUX2O14529 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC38.46■■■■□ 3.75
CUX2O14529 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC38.45■■■■□ 3.75
CUX2O14529 UNC93B4-201ENST00000505679 747 ntBASIC38.45■■■■□ 3.75
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms