Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CHL1O00533 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CHL1O00533 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC28.69■■■□□ 2.18
CHL1O00533 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHL1O00533 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
CHL1O00533 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC28.69■■■□□ 2.18
CHL1O00533 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHL1O00533 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHL1O00533 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
CHL1O00533 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CHL1O00533 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28.69■■■□□ 2.18
CHL1O00533 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHL1O00533 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHL1O00533 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CHL1O00533 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.68■■■□□ 2.18
CHL1O00533 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CHL1O00533 AC126544.1-201ENST00000580842 1059 ntBASIC28.68■■■□□ 2.18
CHL1O00533 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC28.68■■■□□ 2.18
CHL1O00533 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC28.68■■■□□ 2.18
CHL1O00533 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHL1O00533 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.67■■■□□ 2.18
CHL1O00533 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC28.67■■■□□ 2.18
CHL1O00533 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CHL1O00533 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.67■■■□□ 2.18
CHL1O00533 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.67■■■□□ 2.18
CHL1O00533 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.67■■■□□ 2.18
CHL1O00533 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
CHL1O00533 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
CHL1O00533 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHL1O00533 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHL1O00533 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
CHL1O00533 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHL1O00533 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHL1O00533 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC28.66■■■□□ 2.18
CHL1O00533 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CHL1O00533 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
CHL1O00533 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.66■■■□□ 2.18
CHL1O00533 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
CHL1O00533 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC28.66■■■□□ 2.18
CHL1O00533 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHL1O00533 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHL1O00533 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHL1O00533 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHL1O00533 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC28.65■■■□□ 2.18
CHL1O00533 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CHL1O00533 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHL1O00533 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CHL1O00533 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHL1O00533 MIR935-201ENST00000401179 91 ntBASIC28.65■■■□□ 2.18
CHL1O00533 AP005435.1-201ENST00000529293 1178 ntBASIC28.65■■■□□ 2.18
CHL1O00533 RHOF-204ENST00000537265 699 ntTSL 2 BASIC28.65■■■□□ 2.18
CHL1O00533 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHL1O00533 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHL1O00533 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.64■■■□□ 2.18
CHL1O00533 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHL1O00533 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHL1O00533 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC28.64■■■□□ 2.18
CHL1O00533 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHL1O00533 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CHL1O00533 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC28.64■■■□□ 2.18
CHL1O00533 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.64■■■□□ 2.18
CHL1O00533 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHL1O00533 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CHL1O00533 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHL1O00533 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHL1O00533 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHL1O00533 PKM-204ENST00000449901 2526 ntTSL 2 BASIC28.63■■■□□ 2.17
CHL1O00533 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHL1O00533 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC28.63■■■□□ 2.17
CHL1O00533 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC28.63■■■□□ 2.17
CHL1O00533 IGHV3-19-201ENST00000521488 291 ntBASIC28.63■■■□□ 2.17
CHL1O00533 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.63■■■□□ 2.17
CHL1O00533 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.63■■■□□ 2.17
CHL1O00533 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHL1O00533 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
CHL1O00533 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC28.62■■■□□ 2.17
CHL1O00533 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHL1O00533 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CHL1O00533 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
CHL1O00533 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC28.62■■■□□ 2.17
CHL1O00533 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC28.61■■■□□ 2.17
CHL1O00533 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
CHL1O00533 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC28.61■■■□□ 2.17
CHL1O00533 IRS3P-201ENST00000223076 1006 ntBASIC28.61■■■□□ 2.17
CHL1O00533 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.61■■■□□ 2.17
CHL1O00533 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC28.61■■■□□ 2.17
CHL1O00533 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CHL1O00533 AL031602.1-201ENST00000633169 911 ntBASIC28.61■■■□□ 2.17
CHL1O00533 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CHL1O00533 TSPY26P-201ENST00000476365 1326 ntBASIC28.61■■■□□ 2.17
CHL1O00533 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC28.61■■■□□ 2.17
CHL1O00533 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
CHL1O00533 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC28.6■■■□□ 2.17
CHL1O00533 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CHL1O00533 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CHL1O00533 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.6■■■□□ 2.17
CHL1O00533 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.6■■■□□ 2.17
CHL1O00533 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CHL1O00533 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CHL1O00533 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms