Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TVP23AA6NH52 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TVP23AA6NH52 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TVP23AA6NH52 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TVP23AA6NH52 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TVP23AA6NH52 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TVP23AA6NH52 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TVP23AA6NH52 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TVP23AA6NH52 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TVP23AA6NH52 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TVP23AA6NH52 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TVP23AA6NH52 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.72■□□□□ 0.75
TVP23AA6NH52 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.72■□□□□ 0.75
TVP23AA6NH52 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.72■□□□□ 0.75
TVP23AA6NH52 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
TVP23AA6NH52 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.72■□□□□ 0.75
TVP23AA6NH52 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TVP23AA6NH52 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TVP23AA6NH52 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TVP23AA6NH52 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TVP23AA6NH52 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.72■□□□□ 0.75
TVP23AA6NH52 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TVP23AA6NH52 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.72■□□□□ 0.75
TVP23AA6NH52 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.71■□□□□ 0.75
TVP23AA6NH52 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.71■□□□□ 0.75
TVP23AA6NH52 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TVP23AA6NH52 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.71■□□□□ 0.75
TVP23AA6NH52 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TVP23AA6NH52 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TVP23AA6NH52 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TVP23AA6NH52 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TVP23AA6NH52 PKD1P6-201ENST00000343738 4769 ntBASIC19.71■□□□□ 0.75
TVP23AA6NH52 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TVP23AA6NH52 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TVP23AA6NH52 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TVP23AA6NH52 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TVP23AA6NH52 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TVP23AA6NH52 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TVP23AA6NH52 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TVP23AA6NH52 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TVP23AA6NH52 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TVP23AA6NH52 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.7■□□□□ 0.74
TVP23AA6NH52 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.7■□□□□ 0.74
TVP23AA6NH52 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TVP23AA6NH52 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.7■□□□□ 0.74
TVP23AA6NH52 AC242852.2-201ENST00000615738 1807 ntBASIC19.69■□□□□ 0.74
TVP23AA6NH52 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TVP23AA6NH52 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TVP23AA6NH52 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TVP23AA6NH52 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TVP23AA6NH52 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TVP23AA6NH52 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.69■□□□□ 0.74
TVP23AA6NH52 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TVP23AA6NH52 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.69■□□□□ 0.74
TVP23AA6NH52 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TVP23AA6NH52 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TVP23AA6NH52 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.69■□□□□ 0.74
TVP23AA6NH52 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TVP23AA6NH52 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TVP23AA6NH52 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.69■□□□□ 0.74
TVP23AA6NH52 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.68■□□□□ 0.74
TVP23AA6NH52 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
TVP23AA6NH52 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TVP23AA6NH52 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TVP23AA6NH52 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TVP23AA6NH52 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TVP23AA6NH52 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TVP23AA6NH52 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TVP23AA6NH52 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
TVP23AA6NH52 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.68■□□□□ 0.74
TVP23AA6NH52 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.68■□□□□ 0.74
TVP23AA6NH52 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TVP23AA6NH52 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TVP23AA6NH52 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TVP23AA6NH52 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.68■□□□□ 0.74
TVP23AA6NH52 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TVP23AA6NH52 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TVP23AA6NH52 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TVP23AA6NH52 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TVP23AA6NH52 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TVP23AA6NH52 AC127496.7-201ENST00000625110 1798 ntBASIC19.67■□□□□ 0.74
TVP23AA6NH52 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TVP23AA6NH52 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TVP23AA6NH52 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TVP23AA6NH52 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
TVP23AA6NH52 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TVP23AA6NH52 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.67■□□□□ 0.74
TVP23AA6NH52 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.67■□□□□ 0.74
TVP23AA6NH52 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TVP23AA6NH52 AC092028.1-203ENST00000608262 953 ntBASIC19.67■□□□□ 0.74
TVP23AA6NH52 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TVP23AA6NH52 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TVP23AA6NH52 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TVP23AA6NH52 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TVP23AA6NH52 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.67■□□□□ 0.74
TVP23AA6NH52 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 LINC01529-204ENST00000636474 1715 ntBASIC19.66■□□□□ 0.74
TVP23AA6NH52 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms