Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.64■□□□□ 0.89
SH3PXD2BA1X283 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3PXD2BA1X283 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SH3PXD2BA1X283 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3PXD2BA1X283 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SH3PXD2BA1X283 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.64■□□□□ 0.89
SH3PXD2BA1X283 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 KRT8P33-201ENST00000508125 1423 ntBASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SH3PXD2BA1X283 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.62■□□□□ 0.89
SH3PXD2BA1X283 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3PXD2BA1X283 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3PXD2BA1X283 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.62■□□□□ 0.89
SH3PXD2BA1X283 RARRES2P1-201ENST00000474487 481 ntBASIC20.62■□□□□ 0.89
SH3PXD2BA1X283 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SH3PXD2BA1X283 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3PXD2BA1X283 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3PXD2BA1X283 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3PXD2BA1X283 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3PXD2BA1X283 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SH3PXD2BA1X283 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.62■□□□□ 0.89
SH3PXD2BA1X283 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3PXD2BA1X283 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3PXD2BA1X283 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3PXD2BA1X283 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.61■□□□□ 0.89
SH3PXD2BA1X283 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SH3PXD2BA1X283 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3PXD2BA1X283 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3PXD2BA1X283 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3PXD2BA1X283 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SH3PXD2BA1X283 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SH3PXD2BA1X283 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH3PXD2BA1X283 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3PXD2BA1X283 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 AC079630.1-202ENST00000618127 1840 ntBASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
SH3PXD2BA1X283 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3PXD2BA1X283 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SH3PXD2BA1X283 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SH3PXD2BA1X283 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.59■□□□□ 0.89
SH3PXD2BA1X283 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH3PXD2BA1X283 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.59■□□□□ 0.89
SH3PXD2BA1X283 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3PXD2BA1X283 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3PXD2BA1X283 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SH3PXD2BA1X283 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3PXD2BA1X283 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SH3PXD2BA1X283 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
SH3PXD2BA1X283 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH3PXD2BA1X283 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.58■□□□□ 0.89
SH3PXD2BA1X283 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.58■□□□□ 0.89
SH3PXD2BA1X283 AC120024.1-201ENST00000562672 995 ntBASIC20.58■□□□□ 0.89
SH3PXD2BA1X283 AC074183.2-201ENST00000623112 922 ntBASIC20.58■□□□□ 0.89
SH3PXD2BA1X283 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.58■□□□□ 0.89
SH3PXD2BA1X283 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SH3PXD2BA1X283 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SH3PXD2BA1X283 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SH3PXD2BA1X283 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SH3PXD2BA1X283 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 AF131216.4-201ENST00000638924 1588 ntBASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH3PXD2BA1X283 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3PXD2BA1X283 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3PXD2BA1X283 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3PXD2BA1X283 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3PXD2BA1X283 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH3PXD2BA1X283 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms