Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV3S1A0A5B6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV3S1A0A5B6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV3S1A0A5B6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV3S1A0A5B6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV3S1A0A5B6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV3S1A0A5B6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV3S1A0A5B6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.77■□□□□ 0.92
TCRBV3S1A0A5B6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV3S1A0A5B6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV3S1A0A5B6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TCRBV3S1A0A5B6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.77■□□□□ 0.91
TCRBV3S1A0A5B6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 LONRF2P2-201ENST00000439212 571 ntBASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
TCRBV3S1A0A5B6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV3S1A0A5B6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV3S1A0A5B6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV3S1A0A5B6 MIR639-201ENST00000384974 98 ntBASIC20.75■□□□□ 0.91
TCRBV3S1A0A5B6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV3S1A0A5B6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TCRBV3S1A0A5B6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV3S1A0A5B6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBV3S1A0A5B6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TCRBV3S1A0A5B6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TCRBV3S1A0A5B6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.73■□□□□ 0.91
TCRBV3S1A0A5B6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TCRBV3S1A0A5B6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.73■□□□□ 0.91
TCRBV3S1A0A5B6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TCRBV3S1A0A5B6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.73■□□□□ 0.91
TCRBV3S1A0A5B6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV3S1A0A5B6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV3S1A0A5B6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.72■□□□□ 0.91
TCRBV3S1A0A5B6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.72■□□□□ 0.91
TCRBV3S1A0A5B6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TCRBV3S1A0A5B6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TCRBV3S1A0A5B6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV3S1A0A5B6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV3S1A0A5B6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV3S1A0A5B6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
TCRBV3S1A0A5B6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.71■□□□□ 0.91
TCRBV3S1A0A5B6 AC244015.2-201ENST00000616358 1861 ntBASIC20.71■□□□□ 0.91
TCRBV3S1A0A5B6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
TCRBV3S1A0A5B6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.71■□□□□ 0.91
TCRBV3S1A0A5B6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TCRBV3S1A0A5B6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV3S1A0A5B6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TCRBV3S1A0A5B6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV3S1A0A5B6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV3S1A0A5B6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV3S1A0A5B6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TCRBV3S1A0A5B6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms