Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RNF103-CHMP3A0A140T963 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF103-CHMP3A0A140T963 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF103-CHMP3A0A140T963 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RNF103-CHMP3A0A140T963 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF103-CHMP3A0A140T963 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF103-CHMP3A0A140T963 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
RNF103-CHMP3A0A140T963 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF103-CHMP3A0A140T963 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RNF103-CHMP3A0A140T963 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF103-CHMP3A0A140T963 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF103-CHMP3A0A140T963 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF103-CHMP3A0A140T963 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF103-CHMP3A0A140T963 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF103-CHMP3A0A140T963 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF103-CHMP3A0A140T963 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF103-CHMP3A0A140T963 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF103-CHMP3A0A140T963 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF103-CHMP3A0A140T963 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF103-CHMP3A0A140T963 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF103-CHMP3A0A140T963 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF103-CHMP3A0A140T963 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
RNF103-CHMP3A0A140T963 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF103-CHMP3A0A140T963 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RNF103-CHMP3A0A140T963 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RNF103-CHMP3A0A140T963 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF103-CHMP3A0A140T963 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF103-CHMP3A0A140T963 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RNF103-CHMP3A0A140T963 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF103-CHMP3A0A140T963 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF103-CHMP3A0A140T963 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
RNF103-CHMP3A0A140T963 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RNF103-CHMP3A0A140T963 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF103-CHMP3A0A140T963 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF103-CHMP3A0A140T963 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF103-CHMP3A0A140T963 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF103-CHMP3A0A140T963 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF103-CHMP3A0A140T963 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF103-CHMP3A0A140T963 AL031848.2-201ENST00000607670 837 ntBASIC21.19■□□□□ 0.98
RNF103-CHMP3A0A140T963 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF103-CHMP3A0A140T963 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF103-CHMP3A0A140T963 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF103-CHMP3A0A140T963 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RNF103-CHMP3A0A140T963 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RNF103-CHMP3A0A140T963 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
RNF103-CHMP3A0A140T963 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF103-CHMP3A0A140T963 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF103-CHMP3A0A140T963 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF103-CHMP3A0A140T963 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF103-CHMP3A0A140T963 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF103-CHMP3A0A140T963 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF103-CHMP3A0A140T963 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF103-CHMP3A0A140T963 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF103-CHMP3A0A140T963 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF103-CHMP3A0A140T963 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF103-CHMP3A0A140T963 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF103-CHMP3A0A140T963 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF103-CHMP3A0A140T963 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF103-CHMP3A0A140T963 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF103-CHMP3A0A140T963 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF103-CHMP3A0A140T963 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF103-CHMP3A0A140T963 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF103-CHMP3A0A140T963 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF103-CHMP3A0A140T963 AL137060.1-201ENST00000618151 2648 ntBASIC21.17■□□□□ 0.98
RNF103-CHMP3A0A140T963 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.17■□□□□ 0.98
RNF103-CHMP3A0A140T963 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF103-CHMP3A0A140T963 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF103-CHMP3A0A140T963 AC242852.2-201ENST00000615738 1807 ntBASIC21.17■□□□□ 0.98
RNF103-CHMP3A0A140T963 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 SNX5-217ENST00000606557 1087 ntBASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF103-CHMP3A0A140T963 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms