Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRBV6-1A0A0K0K1D8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRBV6-1A0A0K0K1D8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRBV6-1A0A0K0K1D8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-1A0A0K0K1D8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-1A0A0K0K1D8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-1A0A0K0K1D8 RNF126P1-201ENST00000567452 1320 ntBASIC16.59■□□□□ 0.25
TRBV6-1A0A0K0K1D8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV6-1A0A0K0K1D8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV6-1A0A0K0K1D8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-1A0A0K0K1D8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRBV6-1A0A0K0K1D8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
TRBV6-1A0A0K0K1D8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.58■□□□□ 0.25
TRBV6-1A0A0K0K1D8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-1A0A0K0K1D8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-1A0A0K0K1D8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRBV6-1A0A0K0K1D8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRBV6-1A0A0K0K1D8 AF131216.4-201ENST00000638924 1588 ntBASIC16.58■□□□□ 0.24
TRBV6-1A0A0K0K1D8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-1A0A0K0K1D8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.58■□□□□ 0.24
TRBV6-1A0A0K0K1D8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-1A0A0K0K1D8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-1A0A0K0K1D8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.57■□□□□ 0.24
TRBV6-1A0A0K0K1D8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-1A0A0K0K1D8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 AC244015.2-201ENST00000616358 1861 ntBASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MIR4449-201ENST00000578365 66 ntBASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-1A0A0K0K1D8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRBV6-1A0A0K0K1D8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-1A0A0K0K1D8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.53■□□□□ 0.24
TRBV6-1A0A0K0K1D8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-1A0A0K0K1D8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV6-1A0A0K0K1D8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-1A0A0K0K1D8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.53■□□□□ 0.24
TRBV6-1A0A0K0K1D8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-1A0A0K0K1D8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-1A0A0K0K1D8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-1A0A0K0K1D8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.52■□□□□ 0.24
TRBV6-1A0A0K0K1D8 FP325331.1-202ENST00000623531 1380 ntBASIC16.52■□□□□ 0.24
TRBV6-1A0A0K0K1D8 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.52■□□□□ 0.24
TRBV6-1A0A0K0K1D8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
TRBV6-1A0A0K0K1D8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-1A0A0K0K1D8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms