Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 AC138932.1-201ENST00000534164 6830 ntBASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV8-6A0A0B4J262 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-6A0A0B4J262 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-6A0A0B4J262 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-6A0A0B4J262 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-6A0A0B4J262 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-6A0A0B4J262 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-6A0A0B4J262 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-6A0A0B4J262 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-6A0A0B4J262 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV8-6A0A0B4J262 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRAV8-6A0A0B4J262 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV8-6A0A0B4J262 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV8-6A0A0B4J262 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
TRAV8-6A0A0B4J262 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV8-6A0A0B4J262 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV8-6A0A0B4J262 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV8-6A0A0B4J262 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 GUSBP5-202ENST00000510805 1989 ntBASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms