Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV1-2A0A0B4J238 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV1-2A0A0B4J238 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TRAV1-2A0A0B4J238 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV1-2A0A0B4J238 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV1-2A0A0B4J238 AC010542.4-201ENST00000563151 1910 ntBASIC19.28■□□□□ 0.68
TRAV1-2A0A0B4J238 DUX4L9-201ENST00000449051 1259 ntBASIC19.28■□□□□ 0.68
TRAV1-2A0A0B4J238 AC022616.5-201ENST00000518796 181 ntBASIC19.28■□□□□ 0.68
TRAV1-2A0A0B4J238 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAV1-2A0A0B4J238 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
TRAV1-2A0A0B4J238 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAV1-2A0A0B4J238 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV1-2A0A0B4J238 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TRAV1-2A0A0B4J238 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV1-2A0A0B4J238 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRAV1-2A0A0B4J238 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV1-2A0A0B4J238 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV1-2A0A0B4J238 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAV1-2A0A0B4J238 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRAV1-2A0A0B4J238 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAV1-2A0A0B4J238 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV1-2A0A0B4J238 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV1-2A0A0B4J238 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV1-2A0A0B4J238 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV1-2A0A0B4J238 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV1-2A0A0B4J238 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.27■□□□□ 0.67
TRAV1-2A0A0B4J238 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV1-2A0A0B4J238 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV1-2A0A0B4J238 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV1-2A0A0B4J238 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRAV1-2A0A0B4J238 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV1-2A0A0B4J238 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV1-2A0A0B4J238 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV1-2A0A0B4J238 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAV1-2A0A0B4J238 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV1-2A0A0B4J238 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV1-2A0A0B4J238 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAV1-2A0A0B4J238 AC004448.1-201ENST00000458332 883 ntBASIC19.25■□□□□ 0.67
TRAV1-2A0A0B4J238 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAV1-2A0A0B4J238 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV1-2A0A0B4J238 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV1-2A0A0B4J238 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV1-2A0A0B4J238 AC144652.1-201ENST00000609974 1624 ntBASIC19.25■□□□□ 0.67
TRAV1-2A0A0B4J238 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 SLC25A24-204ENST00000569674 2357 ntBASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV1-2A0A0B4J238 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRAV1-2A0A0B4J238 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV1-2A0A0B4J238 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV1-2A0A0B4J238 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
TRAV1-2A0A0B4J238 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV1-2A0A0B4J238 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV1-2A0A0B4J238 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV1-2A0A0B4J238 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRAV1-2A0A0B4J238 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRAV1-2A0A0B4J238 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV1-2A0A0B4J238 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV1-2A0A0B4J238 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV1-2A0A0B4J238 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV1-2A0A0B4J238 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV1-2A0A0B4J238 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRAV1-2A0A0B4J238 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAV1-2A0A0B4J238 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
TRAV1-2A0A0B4J238 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.22■□□□□ 0.67
TRAV1-2A0A0B4J238 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV1-2A0A0B4J238 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV1-2A0A0B4J238 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV1-2A0A0B4J238 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV1-2A0A0B4J238 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TRAV1-2A0A0B4J238 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAV1-2A0A0B4J238 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV1-2A0A0B4J238 AC019171.1-201ENST00000601251 1056 ntBASIC19.21■□□□□ 0.67
TRAV1-2A0A0B4J238 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV1-2A0A0B4J238 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV1-2A0A0B4J238 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV1-2A0A0B4J238 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRAV1-2A0A0B4J238 RNF126P1-201ENST00000567452 1320 ntBASIC19.21■□□□□ 0.67
TRAV1-2A0A0B4J238 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV1-2A0A0B4J238 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV1-2A0A0B4J238 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV1-2A0A0B4J238 AF131216.4-201ENST00000638924 1588 ntBASIC19.2■□□□□ 0.66
TRAV1-2A0A0B4J238 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV1-2A0A0B4J238 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms