Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 AC131281.2-201ENST00000520478 145 ntBASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 AL499627.2-201ENST00000606283 725 ntBASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 AC131212.1-201ENST00000613771 668 ntBASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV2A0A0B4J234 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRAV2A0A0B4J234 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 AL138724.1-201ENST00000606771 1088 ntBASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 AC012676.1-201ENST00000574705 1949 ntBASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV2A0A0B4J234 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TRAV2A0A0B4J234 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 AC099791.2-201ENST00000605725 427 ntBASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 MIR4466-201ENST00000606121 54 ntBASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV2A0A0B4J234 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV2A0A0B4J234 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV2A0A0B4J234 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV2A0A0B4J234 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV2A0A0B4J234 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV2A0A0B4J234 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV2A0A0B4J234 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms