Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AC105206.1-202ENST00000314927 2368 ntBASIC13.29□□□□□ -0.28
SATB2Q9UPW6 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 BEND3P3-201ENST00000611030 2440 ntBASIC13.28□□□□□ -0.28
SATB2Q9UPW6 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AC092570.1-201ENST00000414446 469 ntBASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AL080243.1-201ENST00000423293 1060 ntBASIC13.28□□□□□ -0.28
SATB2Q9UPW6 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.28□□□□□ -0.28
SATB2Q9UPW6 NRADDP-201ENST00000437305 691 ntBASIC13.28□□□□□ -0.28
SATB2Q9UPW6 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 IGHEP2-201ENST00000519308 1256 ntBASIC13.28□□□□□ -0.28
SATB2Q9UPW6 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AC087203.1-201ENST00000532111 1181 ntBASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AC073869.4-201ENST00000620841 800 ntBASIC13.28□□□□□ -0.28
SATB2Q9UPW6 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AC005274.1-201ENST00000623460 802 ntBASIC13.28□□□□□ -0.28
SATB2Q9UPW6 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AC139713.2-207ENST00000641556 1292 ntBASIC13.28□□□□□ -0.28
SATB2Q9UPW6 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 AC130686.1-201ENST00000622936 2466 ntBASIC13.28□□□□□ -0.28
SATB2Q9UPW6 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SATB2Q9UPW6 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SATB2Q9UPW6 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 AC022080.1-201ENST00000366255 781 ntBASIC13.27□□□□□ -0.29
SATB2Q9UPW6 AC104961.1-201ENST00000427605 771 ntBASIC13.27□□□□□ -0.29
SATB2Q9UPW6 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 RNLS-203ENST00000437752 525 ntTSL 2 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 RN7SL128P-201ENST00000467883 305 ntBASIC13.27□□□□□ -0.29
SATB2Q9UPW6 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 HNRNPA1P16-201ENST00000575692 955 ntBASIC13.27□□□□□ -0.29
SATB2Q9UPW6 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 RN7SL121P-201ENST00000584223 273 ntBASIC13.27□□□□□ -0.29
SATB2Q9UPW6 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC13.27□□□□□ -0.29
SATB2Q9UPW6 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms