Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 AC006262.1-201ENST00000593980 1316 ntTSL 5 BASIC16.45■□□□□ 0.22
RC3H1Q5TC82 AC124944.3-201ENST00000607976 1304 ntBASIC16.45■□□□□ 0.22
RC3H1Q5TC82 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 IL32-204ENST00000396887 789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 PIN1P1-202ENST00000439639 301 ntBASIC16.44■□□□□ 0.22
RC3H1Q5TC82 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 CTSLP1-201ENST00000457530 1002 ntBASIC16.44■□□□□ 0.22
RC3H1Q5TC82 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 UBA3-212ENST00000630585 390 ntTSL 4 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 AL807752.1-201ENST00000395082 1322 ntBASIC16.44■□□□□ 0.22
RC3H1Q5TC82 MEF2C-207ENST00000503554 1345 ntTSL 5 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RC3H1Q5TC82 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 FAM90A12P-201ENST00000519497 2375 ntBASIC16.43■□□□□ 0.22
RC3H1Q5TC82 FAM90A24P-201ENST00000520792 2369 ntBASIC16.43■□□□□ 0.22
RC3H1Q5TC82 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 AC018445.4-201ENST00000624066 2291 ntBASIC16.43■□□□□ 0.22
RC3H1Q5TC82 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 FAM90A22P-201ENST00000400142 1395 ntBASIC16.43■□□□□ 0.22
RC3H1Q5TC82 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 PKD1P5-201ENST00000532415 10291 ntBASIC16.43■□□□□ 0.22
RC3H1Q5TC82 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 C1orf158-201ENST00000376210 695 ntTSL 3 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 FAM45BP-201ENST00000408950 1074 ntBASIC16.43■□□□□ 0.22
RC3H1Q5TC82 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 ABCC6P2-201ENST00000526069 590 ntBASIC16.43■□□□□ 0.22
RC3H1Q5TC82 AC133539.1-201ENST00000562644 420 ntTSL 5 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 MIR4459-201ENST00000581837 66 ntBASIC16.43■□□□□ 0.22
RC3H1Q5TC82 RN7SL460P-201ENST00000582806 258 ntBASIC16.43■□□□□ 0.22
RC3H1Q5TC82 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 AC007274.3-201ENST00000619838 385 ntBASIC16.43■□□□□ 0.22
RC3H1Q5TC82 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RC3H1Q5TC82 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms