Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.38□□□□□ -0.43
CLDN20P56880 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.38□□□□□ -0.43
CLDN20P56880 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.38□□□□□ -0.43
CLDN20P56880 AP001065.2-201ENST00000617205 644 ntBASIC12.38□□□□□ -0.43
CLDN20P56880 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.38□□□□□ -0.43
CLDN20P56880 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CLDN20P56880 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
CLDN20P56880 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.38□□□□□ -0.43
CLDN20P56880 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.38□□□□□ -0.43
CLDN20P56880 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLDN20P56880 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.37□□□□□ -0.43
CLDN20P56880 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 AC108024.1-201ENST00000626286 1721 ntBASIC12.37□□□□□ -0.43
CLDN20P56880 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.37□□□□□ -0.43
CLDN20P56880 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.37□□□□□ -0.43
CLDN20P56880 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 RN7SL23P-201ENST00000484055 275 ntBASIC12.37□□□□□ -0.43
CLDN20P56880 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.37□□□□□ -0.43
CLDN20P56880 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.37□□□□□ -0.43
CLDN20P56880 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.37□□□□□ -0.43
CLDN20P56880 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.37□□□□□ -0.43
CLDN20P56880 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.37□□□□□ -0.43
CLDN20P56880 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 RN7SL556P-201ENST00000582856 298 ntBASIC12.37□□□□□ -0.43
CLDN20P56880 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.37□□□□□ -0.43
CLDN20P56880 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.37□□□□□ -0.43
CLDN20P56880 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.37□□□□□ -0.43
CLDN20P56880 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 AC022497.1-201ENST00000624916 3691 ntBASIC12.37□□□□□ -0.43
CLDN20P56880 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CLDN20P56880 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
CLDN20P56880 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLDN20P56880 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDN20P56880 AOC4P-203ENST00000566825 2289 ntBASIC12.36□□□□□ -0.43
CLDN20P56880 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.36□□□□□ -0.43
CLDN20P56880 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.36□□□□□ -0.43
CLDN20P56880 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDN20P56880 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDN20P56880 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDN20P56880 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDN20P56880 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDN20P56880 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDN20P56880 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CLDN20P56880 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CLDN20P56880 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.36□□□□□ -0.43
CLDN20P56880 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CLDN20P56880 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.36□□□□□ -0.43
CLDN20P56880 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.36□□□□□ -0.43
CLDN20P56880 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CLDN20P56880 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CLDN20P56880 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms