Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 AL080243.1-201ENST00000423293 1060 ntBASIC12.37□□□□□ -0.43
RFC3P40938 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC12.37□□□□□ -0.43
RFC3P40938 AC103563.1-201ENST00000429316 123 ntBASIC12.37□□□□□ -0.43
RFC3P40938 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC12.37□□□□□ -0.43
RFC3P40938 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC12.37□□□□□ -0.43
RFC3P40938 AC023968.2-201ENST00000560593 1049 ntBASIC12.37□□□□□ -0.43
RFC3P40938 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 AC006548.2-201ENST00000605217 529 ntBASIC12.37□□□□□ -0.43
RFC3P40938 AL139339.2-201ENST00000608063 657 ntBASIC12.37□□□□□ -0.43
RFC3P40938 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RFC3P40938 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RFC3P40938 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.37□□□□□ -0.43
RFC3P40938 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
RFC3P40938 AOC4P-203ENST00000566825 2289 ntBASIC12.36□□□□□ -0.43
RFC3P40938 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.36□□□□□ -0.43
RFC3P40938 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.36□□□□□ -0.43
RFC3P40938 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RFC3P40938 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RFC3P40938 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC12.36□□□□□ -0.43
RFC3P40938 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC12.36□□□□□ -0.43
RFC3P40938 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC12.36□□□□□ -0.43
RFC3P40938 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.36□□□□□ -0.43
RFC3P40938 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC12.36□□□□□ -0.43
RFC3P40938 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RFC3P40938 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC12.36□□□□□ -0.43
RFC3P40938 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC12.36□□□□□ -0.43
RFC3P40938 RN7SL128P-201ENST00000467883 305 ntBASIC12.36□□□□□ -0.43
RFC3P40938 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC12.36□□□□□ -0.43
RFC3P40938 CISD2-202ENST00000503643 808 ntTSL 2 BASIC12.36□□□□□ -0.43
RFC3P40938 PIGCP1-201ENST00000527583 895 ntBASIC12.36□□□□□ -0.43
RFC3P40938 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.36□□□□□ -0.43
RFC3P40938 METTL7AP1-201ENST00000547343 496 ntBASIC12.36□□□□□ -0.43
RFC3P40938 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC12.36□□□□□ -0.43
RFC3P40938 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC12.36□□□□□ -0.43
RFC3P40938 SRP14-204ENST00000558720 780 ntTSL 2 BASIC12.36□□□□□ -0.43
RFC3P40938 FAM187B2P-201ENST00000577135 713 ntBASIC12.36□□□□□ -0.43
RFC3P40938 RNF146-211ENST00000609447 607 ntTSL 4 BASIC12.36□□□□□ -0.43
RFC3P40938 URAHP-205ENST00000610227 398 ntBASIC12.36□□□□□ -0.43
RFC3P40938 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.36□□□□□ -0.43
RFC3P40938 AC134407.3-201ENST00000624035 2139 ntBASIC12.36□□□□□ -0.43
RFC3P40938 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms