Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 AL627422.1-201ENST00000434104 580 ntBASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 UPF3AP2-201ENST00000457924 1132 ntBASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 IMP3P2-201ENST00000489760 475 ntBASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 RN7SL564P-201ENST00000496309 250 ntBASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 AC134698.3-201ENST00000523880 214 ntBASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 AC084346.2-201ENST00000607097 949 ntBASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC10.21□□□□□ -0.77
HLA-DRB4X5D2U9 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 ERG-211ENST00000453032 1595 ntTSL 2 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
HLA-DRB4X5D2U9 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 DDX12P-201ENST00000432996 2947 ntBASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 PAM-203ENST00000346918 3302 ntTSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 GBP1P1-201ENST00000394662 1740 ntBASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms