Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 AL137779.3-201ENST00000553295 729 ntBASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 AC092171.5-201ENST00000608012 942 ntBASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 AC244452.3-201ENST00000636814 210 ntBASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
POLR2J2Q9GZM3 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 AC018638.5-201ENST00000450885 754 ntBASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 SCARNA12-201ENST00000459155 270 ntBASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 SCARNA20.5-201ENST00000516991 142 ntBASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 AL109837.1-201ENST00000603272 613 ntBASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 AC011700.1-201ENST00000610409 2627 ntBASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 ODCP-201ENST00000459650 1639 ntBASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
POLR2J2Q9GZM3 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.46□□□□□ -0.41
POLR2J2Q9GZM3 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC12.46□□□□□ -0.41
POLR2J2Q9GZM3 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms