Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
CLCN1P35523 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CLCN1P35523 CNOT4-203ENST00000361528 2215 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN1P35523 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 AC092117.2-201ENST00000623937 1659 ntBASIC15.36■□□□□ 0.05
CLCN1P35523 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CLCN1P35523 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CLCN1P35523 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLCN1P35523 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN1P35523 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 AC007041.1-201ENST00000438989 1155 ntBASIC15.36■□□□□ 0.05
CLCN1P35523 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC15.36■□□□□ 0.05
CLCN1P35523 AL591846.1-201ENST00000451736 433 ntBASIC15.36■□□□□ 0.05
CLCN1P35523 UPF3AP2-201ENST00000457924 1132 ntBASIC15.36■□□□□ 0.05
CLCN1P35523 AC021723.1-201ENST00000486306 515 ntBASIC15.36■□□□□ 0.05
CLCN1P35523 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN1P35523 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.36■□□□□ 0.05
CLCN1P35523 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.36■□□□□ 0.05
CLCN1P35523 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 AL133445.2-201ENST00000611191 527 ntBASIC15.36■□□□□ 0.05
CLCN1P35523 AP000346.4-201ENST00000614827 381 ntBASIC15.36■□□□□ 0.05
CLCN1P35523 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CLCN1P35523 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN1P35523 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 AC004899.1-201ENST00000424687 1714 ntBASIC15.36■□□□□ 0.05
CLCN1P35523 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 ZNF572-201ENST00000319286 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLCN1P35523 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN1P35523 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
CLCN1P35523 AC005154.3-201ENST00000419639 1393 ntBASIC15.36■□□□□ 0.05
CLCN1P35523 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN1P35523 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN1P35523 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN1P35523 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLCN1P35523 AL845472.1-202ENST00000624675 4080 ntBASIC15.35■□□□□ 0.05
CLCN1P35523 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 AC018629.1-201ENST00000623381 1736 ntBASIC15.35■□□□□ 0.05
CLCN1P35523 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN1P35523 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CLCN1P35523 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN1P35523 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN1P35523 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLCN1P35523 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN1P35523 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CLCN1P35523 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLCN1P35523 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN1P35523 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN1P35523 XBP1P1-201ENST00000436573 652 ntBASIC15.35■□□□□ 0.05
CLCN1P35523 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN1P35523 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN1P35523 KRT18P15-201ENST00000458108 1291 ntBASIC15.35■□□□□ 0.05
CLCN1P35523 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN1P35523 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC15.35■□□□□ 0.05
CLCN1P35523 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN1P35523 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN1P35523 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN1P35523 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN1P35523 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
CLCN1P35523 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.35■□□□□ 0.05
CLCN1P35523 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN1P35523 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN1P35523 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN1P35523 AC008805.1-201ENST00000590892 364 ntBASIC15.35■□□□□ 0.05
CLCN1P35523 AC092299.1-201ENST00000632679 757 ntBASIC15.35■□□□□ 0.05
CLCN1P35523 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN1P35523 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN1P35523 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN1P35523 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms