Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC11.33□□□□□ -0.6
GAPDHP04406 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC11.33□□□□□ -0.6
GAPDHP04406 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
GAPDHP04406 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
GAPDHP04406 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 AF013593.1-201ENST00000458074 1487 ntBASIC11.32□□□□□ -0.6
GAPDHP04406 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC11.32□□□□□ -0.6
GAPDHP04406 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
GAPDHP04406 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC11.32□□□□□ -0.6
GAPDHP04406 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
GAPDHP04406 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC11.32□□□□□ -0.6
GAPDHP04406 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
GAPDHP04406 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC11.32□□□□□ -0.6
GAPDHP04406 AL807761.2-201ENST00000422849 729 ntBASIC11.32□□□□□ -0.6
GAPDHP04406 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 RN7SL67P-201ENST00000492147 296 ntBASIC11.32□□□□□ -0.6
GAPDHP04406 SUPT4H1P2-201ENST00000501248 353 ntBASIC11.32□□□□□ -0.6
GAPDHP04406 AC245884.6-201ENST00000515672 1067 ntBASIC11.32□□□□□ -0.6
GAPDHP04406 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC11.32□□□□□ -0.6
GAPDHP04406 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
GAPDHP04406 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 AC242376.1-201ENST00000559033 726 ntBASIC11.32□□□□□ -0.6
GAPDHP04406 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC11.32□□□□□ -0.6
GAPDHP04406 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC11.32□□□□□ -0.6
GAPDHP04406 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC11.32□□□□□ -0.6
GAPDHP04406 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC11.32□□□□□ -0.6
GAPDHP04406 AC012044.1-201ENST00000603431 297 ntBASIC11.32□□□□□ -0.6
GAPDHP04406 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
GAPDHP04406 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC11.32□□□□□ -0.6
GAPDHP04406 AC138627.1-207ENST00000641560 1006 ntBASIC11.32□□□□□ -0.6
GAPDHP04406 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 CICP9-201ENST00000444451 1913 ntBASIC11.32□□□□□ -0.6
GAPDHP04406 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 TBC1D3J-201ENST00000620719 1426 ntBASIC11.32□□□□□ -0.6
GAPDHP04406 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
GAPDHP04406 AC010336.1-201ENST00000539278 4739 ntBASIC11.32□□□□□ -0.6
GAPDHP04406 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC11.32□□□□□ -0.6
GAPDHP04406 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC11.32□□□□□ -0.6
GAPDHP04406 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
GAPDHP04406 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC11.31□□□□□ -0.6
GAPDHP04406 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.31□□□□□ -0.6
GAPDHP04406 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC11.31□□□□□ -0.6
GAPDHP04406 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
GAPDHP04406 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GAPDHP04406 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC11.31□□□□□ -0.6
GAPDHP04406 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC11.31□□□□□ -0.6
GAPDHP04406 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
GAPDHP04406 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC11.31□□□□□ -0.6
GAPDHP04406 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GAPDHP04406 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
GAPDHP04406 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
GAPDHP04406 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
GAPDHP04406 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
GAPDHP04406 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
GAPDHP04406 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
GAPDHP04406 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms